Gene
RNA
| Item | Value |
|---|---|
| gene id | G942084 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 10581498 ~ 10582028 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1074426 | True | 207 | lncRNA | 0.42 | 2 | 10581498 | 10582028 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535248 | LOC106579638 | coding | upstream | 213819 | 10305885 ~ 10367679 (+) |
| LOC118937312 | NA | coding | upstream | 312079 | 10267264 ~ 10269419 (+) |
| LOC110535246 | tm14c | coding | upstream | 405970 | 10171849 ~ 10175528 (+) |
| LOC118937311 | LOC106579630 | coding | upstream | 1169221 | 9410878 ~ 9412277 (+) |
| LOC110535239 | LOC106579629 | coding | upstream | 1175627 | 9357029 ~ 9405871 (+) |
| LOC110535252 | LOC106579643 | coding | downstream | 49336 | 10631364 ~ 10639422 (+) |
| vapa | vapa | coding | downstream | 84179 | 10666207 ~ 10671992 (+) |
| LOC110535262 | LOC106579655 | coding | downstream | 443609 | 11025637 ~ 11064599 (+) |
| LOC110535263 | lrrc30 | coding | downstream | 573652 | 11155680 ~ 11158395 (+) |
| LOC110535264 | LOC106579657 | coding | downstream | 596304 | 11178332 ~ 11497838 (+) |
| G942080 | NA | non-coding | upstream | 12413 | 10568876 ~ 10569085 (+) |
| G942077 | NA | non-coding | upstream | 19128 | 10562140 ~ 10562370 (+) |
| G942053 | NA | non-coding | upstream | 64413 | 10510033 ~ 10517085 (+) |
| G942051 | NA | non-coding | upstream | 73903 | 10507185 ~ 10507595 (+) |
| G942048 | NA | non-coding | upstream | 76881 | 10504401 ~ 10504617 (+) |
| G942086 | NA | non-coding | downstream | 1036 | 10583064 ~ 10583350 (+) |
| G942087 | NA | non-coding | downstream | 5749 | 10587777 ~ 10588007 (+) |
| G942092 | NA | non-coding | downstream | 20528 | 10602556 ~ 10602799 (+) |
| G942093 | NA | non-coding | downstream | 22874 | 10604902 ~ 10605107 (+) |
| G942096 | NA | non-coding | downstream | 39420 | 10621448 ~ 10621647 (+) |
| G941893 | NA | other | upstream | 335992 | 10245109 ~ 10245506 (+) |
| LOC118937463 | NA | other | upstream | 1726061 | 8845565 ~ 8855476 (+) |
| G940376 | NA | other | upstream | 1928977 | 8651504 ~ 8652993 (+) |
| G940313 | NA | other | upstream | 2040631 | 8532540 ~ 8540867 (+) |
| G940247 | NA | other | upstream | 2141723 | 8439480 ~ 8439775 (+) |
| G942702 | NA | other | downstream | 528698 | 11110726 ~ 11111336 (+) |
| G944957 | NA | other | downstream | 2805522 | 13387550 ~ 13394875 (+) |
| G946426 | ramp3 | other | downstream | 3482520 | 14064548 ~ 14065869 (+) |
| LOC110535304 | NA | other | downstream | 3573326 | 14154784 ~ 14202999 (+) |
| G946644 | NA | other | downstream | 3728547 | 14310575 ~ 14314318 (+) |
