G942141



Basic Information


Item Value
gene id G942141
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 10730729 ~ 10733085 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1074506
CTGCTCAGTCTGATGCTCTGCCTGGTTCTCCATGTTGTCAGGCTGGTGGTCAGACTGTTCTGGCTGTGCCAACTTCAACTCAGGCTGGTCCTGGTCCTTTTCTTGTTGGGAAGATACCACCTCTGTCTGCAGCACGATCCGCTCCACCTTCTCTGTTGTCTAACAAAGAAAACAAACAAGACATAACCAACAGTCTTCTTGAACCTTCAAAATGGATTGAATCTACAGTAGTATGGAAGCGGATTAAAAAATAACATGAATCTgtagggtgtccaatcaaaaacacCTATTTTGACCAATGAGTAAACTAATGTTAATCGTGCAGATAGTCCTCTAAGAAAAACCAATGGTCCAAACctcatgtctctatcataatccATTCAAAAGTCATTGGAGTTTTTACCGTTGTCAGATGGCTAAGATTAGGGAGGCCAGAGGGAAGAAAGGGGTCAAAAGAAACCTGCACCTCCATGTCAACAGTTATAAGAAACCTGCACCTCTATGTCAACAGTTATAAGAAACCTGCACCTCTATGTCAACAGTTGTTATAAGAAACCTGCACCTCTATGTCAACAGTTGTTATAAGAAACCTGCACCTCCATGTCAACAGTTATAAGAAACCTGCACCTCTATGTCAACAGTTATAAGAAACCTGCACCTCTATGTCAACAGTTGTTATAAGAAACCTGCACCTCTATGTCAACAGTTGTTATAAGAAACCTGCACCTCTATGTCAACTGTTGTTATAAGAAACCTGCACCTCCATGTCAACAGTTATAAGAAACCTGCATCTCCATGTCAACAGTTATAA

Function


NR:

description
band 4.1-like protein 1 isoform X1

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1074506 True 811 lncRNA 0.41 2 10730729 10733085

Neighbor


gene id symbol gene type direction distance location
vapa vapa coding upstream 58737 10666207 ~ 10671992 (+)
LOC110535252 LOC106579643 coding upstream 91307 10631364 ~ 10639422 (+)
LOC110536547 LOC106579641 coding upstream 106709 10395438 ~ 10624020 (+)
LOC110535248 LOC106579638 coding upstream 363050 10305885 ~ 10367679 (+)
LOC118937312 NA coding upstream 461310 10267264 ~ 10269419 (+)
LOC110535262 LOC106579655 coding downstream 292552 11025637 ~ 11064599 (+)
LOC110535263 lrrc30 coding downstream 422595 11155680 ~ 11158395 (+)
LOC110535264 LOC106579657 coding downstream 445247 11178332 ~ 11497838 (+)
trnaa-ugc-48 NA coding downstream 602425 11335510 ~ 11335585 (+)
LOC110535269 LOC106579659 coding downstream 766887 11499972 ~ 11541498 (+)
G942146 NA non-coding upstream 15097 10715001 ~ 10715632 (+)
G942140 NA non-coding upstream 16977 10709833 ~ 10713752 (+)
G942138 NA non-coding upstream 23831 10706585 ~ 10706898 (+)
G942134 LOC106579648 non-coding upstream 26302 10697698 ~ 10704427 (+)
G942124 NA non-coding upstream 43150 10687364 ~ 10687579 (+)
G942541 NA non-coding downstream 101364 10834449 ~ 10834721 (+)
G942543 NA non-coding downstream 101956 10835041 ~ 10837927 (+)
G942547 NA non-coding downstream 121495 10854580 ~ 10854782 (+)
G942540 NA non-coding downstream 139867 10872952 ~ 10873755 (+)
G942570 NA non-coding downstream 163948 10897033 ~ 10897998 (+)
G941893 NA other upstream 485223 10245109 ~ 10245506 (+)
LOC118937463 NA other upstream 1875292 8845565 ~ 8855476 (+)
G940376 NA other upstream 2078208 8651504 ~ 8652993 (+)
G940313 NA other upstream 2189862 8532540 ~ 8540867 (+)
G940247 NA other upstream 2290954 8439480 ~ 8439775 (+)
G942702 NA other downstream 377641 11110726 ~ 11111336 (+)
G944957 NA other downstream 2654465 13387550 ~ 13394875 (+)
G946426 ramp3 other downstream 3331463 14064548 ~ 14065869 (+)
LOC110535304 NA other downstream 3422269 14154784 ~ 14202999 (+)
G946644 NA other downstream 3577490 14310575 ~ 14314318 (+)

Expression



Co-expression Network