Gene
RNA
| Item | Value |
|---|---|
| gene id | G942483 |
| gene name | LOC106590343 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 10743314 ~ 10744677 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106590343 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1074904 | True | 404 | TUCP | 0.45 | 3 | 10743314 | 10744677 |
10,739,600
10,740,000
10,740,400
10,740,800
10,741,200
10,741,600
10,742,000
10,742,400
10,742,800
10,743,200
10,743,600
10,744,000
10,744,400
10,744,800
10,745,200
10,745,600
10,746,000
10,746,400
NC_048575.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535256 | LOC106579648 | coding | downstream | 37217 | 10702517 ~ 10706097 (-) |
| top1mt | LOC106579647 | coding | downstream | 42498 | 10689119 ~ 10700816 (-) |
| LOC110535254 | LOC106579646 | coding | downstream | 61228 | 10672620 ~ 10682086 (-) |
| LOC110535253 | LOC106579644 | coding | downstream | 78190 | 10646474 ~ 10665124 (-) |
| LOC110535251 | LOC106579642 | coding | downstream | 111864 | 10624018 ~ 10631450 (-) |
| LOC110535259 | LOC106579652 | coding | upstream | 91920 | 10836358 ~ 10852797 (-) |
| LOC110535260 | LOC106579653 | coding | upstream | 127294 | 10871971 ~ 10995421 (-) |
| LOC110536548 | LOC106579654 | coding | upstream | 320293 | 11061866 ~ 11143146 (-) |
| LOC110535270 | nub1 | coding | upstream | 804032 | 11548709 ~ 11555017 (-) |
| LOC110535273 | cssa19h9orf152 | coding | upstream | 814615 | 11559292 ~ 11561350 (-) |
| G942478 | NA | non-coding | downstream | 18409 | 10724500 ~ 10724905 (-) |
| G942472 | NA | non-coding | downstream | 25361 | 10708552 ~ 10717953 (-) |
| G942465 | NA | non-coding | downstream | 54551 | 10688542 ~ 10688763 (-) |
| G942454 | NA | non-coding | downstream | 101518 | 10639629 ~ 10642643 (-) |
| G942433 | LOC106579641 | non-coding | downstream | 131581 | 10611471 ~ 10611733 (-) |
| G942486 | NA | non-coding | upstream | 11944 | 10756621 ~ 10757060 (-) |
| G942488 | NA | non-coding | upstream | 15605 | 10760282 ~ 10760553 (-) |
| G942499 | NA | non-coding | upstream | 38630 | 10783307 ~ 10785454 (-) |
| G942534 | NA | non-coding | upstream | 86360 | 10831037 ~ 10831330 (-) |
| G942434 | LOC106579641 | other | downstream | 122630 | 10612420 ~ 10620684 (-) |
| G941131 | NA | other | downstream | 1290949 | 9452001 ~ 9452365 (-) |
| G941112 | LOC106579630 | other | downstream | 1331285 | 9411027 ~ 9412029 (-) |
| G940991 | NA | other | downstream | 1592678 | 9126407 ~ 9150636 (-) |
| LOC110536549 | LOC106579607 | other | upstream | 1603572 | 12348249 ~ 12366127 (-) |
| G945345 | LOC105027308 | other | upstream | 1648720 | 12393397 ~ 12394138 (-) |
| ly86 | NA | other | upstream | 3567835 | 14308595 ~ 14315733 (-) |
| mtfr1 | LOC106579534 | other | upstream | 4139658 | 14884317 ~ 14897579 (-) |
