Gene
RNA
| Item | Value |
|---|---|
| gene id | G942540 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 10872952 ~ 10873755 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1074968 | True | 774 | lncRNA | 0.43 | 2 | 10872952 | 10873755 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| vapa | vapa | coding | upstream | 200960 | 10666207 ~ 10671992 (+) |
| LOC110535252 | LOC106579643 | coding | upstream | 233530 | 10631364 ~ 10639422 (+) |
| LOC110536547 | LOC106579641 | coding | upstream | 248932 | 10395438 ~ 10624020 (+) |
| LOC110535248 | LOC106579638 | coding | upstream | 505273 | 10305885 ~ 10367679 (+) |
| LOC118937312 | NA | coding | upstream | 603533 | 10267264 ~ 10269419 (+) |
| LOC110535262 | LOC106579655 | coding | downstream | 151882 | 11025637 ~ 11064599 (+) |
| LOC110535263 | lrrc30 | coding | downstream | 281925 | 11155680 ~ 11158395 (+) |
| LOC110535264 | LOC106579657 | coding | downstream | 304577 | 11178332 ~ 11497838 (+) |
| trnaa-ugc-48 | NA | coding | downstream | 461755 | 11335510 ~ 11335585 (+) |
| LOC110535269 | LOC106579659 | coding | downstream | 626217 | 11499972 ~ 11541498 (+) |
| G942547 | NA | non-coding | upstream | 18170 | 10854580 ~ 10854782 (+) |
| G942543 | NA | non-coding | upstream | 35025 | 10835041 ~ 10837927 (+) |
| G942541 | NA | non-coding | upstream | 38231 | 10834449 ~ 10834721 (+) |
| G942141 | NA | non-coding | upstream | 139867 | 10730729 ~ 10733085 (+) |
| G942146 | NA | non-coding | upstream | 157320 | 10715001 ~ 10715632 (+) |
| G942570 | NA | non-coding | downstream | 23278 | 10897033 ~ 10897998 (+) |
| G942677 | LOC106579654 | non-coding | downstream | 203433 | 11077188 ~ 11077489 (+) |
| G942678 | LOC106579654 | non-coding | downstream | 204109 | 11077864 ~ 11078117 (+) |
| G942682 | NA | non-coding | downstream | 208398 | 11082153 ~ 11083258 (+) |
| G942683 | NA | non-coding | downstream | 209747 | 11083502 ~ 11083796 (+) |
| G941893 | NA | other | upstream | 627446 | 10245109 ~ 10245506 (+) |
| LOC118937463 | NA | other | upstream | 2017515 | 8845565 ~ 8855476 (+) |
| G940376 | NA | other | upstream | 2220431 | 8651504 ~ 8652993 (+) |
| G940313 | NA | other | upstream | 2332085 | 8532540 ~ 8540867 (+) |
| G940247 | NA | other | upstream | 2433177 | 8439480 ~ 8439775 (+) |
| G942702 | NA | other | downstream | 236971 | 11110726 ~ 11111336 (+) |
| G944957 | NA | other | downstream | 2513795 | 13387550 ~ 13394875 (+) |
| G946426 | ramp3 | other | downstream | 3190793 | 14064548 ~ 14065869 (+) |
| LOC110535304 | NA | other | downstream | 3281599 | 14154784 ~ 14202999 (+) |
| G946644 | NA | other | downstream | 3436820 | 14310575 ~ 14314318 (+) |
