Gene
RNA
| Item | Value |
|---|---|
| gene id | G943032 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 11342090 ~ 11342434 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1075499 | True | 297 | lncRNA | 0.54 | 2 | 11342090 | 11342434 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnaa-ugc-48 | NA | coding | upstream | 6505 | 11335510 ~ 11335585 (+) |
| LOC110535263 | lrrc30 | coding | upstream | 183695 | 11155680 ~ 11158395 (+) |
| LOC110535262 | LOC106579655 | coding | upstream | 277491 | 11025637 ~ 11064599 (+) |
| vapa | vapa | coding | upstream | 670098 | 10666207 ~ 10671992 (+) |
| LOC110535252 | LOC106579643 | coding | upstream | 702668 | 10631364 ~ 10639422 (+) |
| LOC110535269 | LOC106579659 | coding | downstream | 157538 | 11499972 ~ 11541498 (+) |
| LOC110535272 | LOC106579661 | coding | downstream | 203023 | 11545457 ~ 11548240 (+) |
| LOC110535274 | LOC100136506 | coding | downstream | 455645 | 11798079 ~ 11885766 (+) |
| LOC110535275 | NA | coding | downstream | 737829 | 12080263 ~ 12080894 (+) |
| LOC110535276 | LOC106579583 | coding | downstream | 834479 | 12176913 ~ 12191408 (+) |
| G942921 | NA | non-coding | upstream | 97632 | 11164136 ~ 11244458 (+) |
| G942917 | NA | non-coding | upstream | 180562 | 11161299 ~ 11161528 (+) |
| G942915 | LOC100136012 | non-coding | upstream | 181346 | 11160478 ~ 11160744 (+) |
| G942722 | NA | non-coding | upstream | 198955 | 11142893 ~ 11143135 (+) |
| G942719 | NA | non-coding | upstream | 206712 | 11135140 ~ 11135378 (+) |
| G943044 | NA | non-coding | downstream | 34072 | 11376506 ~ 11378471 (+) |
| G943158 | NA | non-coding | downstream | 226359 | 11568793 ~ 11569048 (+) |
| G943185 | NA | non-coding | downstream | 266802 | 11609236 ~ 11610212 (+) |
| G943186 | NA | non-coding | downstream | 275323 | 11617757 ~ 11618092 (+) |
| G942702 | NA | other | upstream | 230754 | 11110726 ~ 11111336 (+) |
| G941893 | NA | other | upstream | 1096584 | 10245109 ~ 10245506 (+) |
| LOC118937463 | NA | other | upstream | 2486653 | 8845565 ~ 8855476 (+) |
| G940376 | NA | other | upstream | 2689569 | 8651504 ~ 8652993 (+) |
| G940313 | NA | other | upstream | 2801223 | 8532540 ~ 8540867 (+) |
| G944957 | NA | other | downstream | 2045116 | 13387550 ~ 13394875 (+) |
| G946426 | ramp3 | other | downstream | 2722114 | 14064548 ~ 14065869 (+) |
| LOC110535304 | NA | other | downstream | 2812920 | 14154784 ~ 14202999 (+) |
| G946644 | NA | other | downstream | 2968141 | 14310575 ~ 14314318 (+) |
| G946643 | NA | other | downstream | 2975574 | 14318008 ~ 14318623 (+) |
