G943185


Basic Information

Item Value
gene id G943185
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 11609236 ~ 11610212 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1075669
atgtttttgctttgtcattatgggatattgtgtgtagattgatgagggggaaaaactatttaatccattttagaataaggctgtaatgtaacaaaatgtggaaaaagtcaaggggcctgaatactttccaaatgcactgtgatGGAAATCAGACAGTTATCAAAACCCCTGCACCCTCTGTTATTTTGGATGCTTTTTAGCACTTAGCCTATTTTCTTTTTCTTCATGCCGACAATACTTtatcctgatctctctctctctctctctctctctctctctctctctctccctttctctctctctctctctctcaaattcaaattcaaattcaaattcaagctgctttattggcatgaaaaacattgtgtcaatattgccaaagcaacaatgtatacaatatacattgtaacaaaattgtaaatgatagcaaataataatataaaatggtagtaaataataatac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1075669 True 463 lncRNA 0.34 2 11609236 11610212

Neighbor

gene id symbol gene type direction distance location
LOC110535272 LOC106579661 coding upstream 60996 11545457 ~ 11548240 (+)
LOC110535269 LOC106579659 coding upstream 67738 11499972 ~ 11541498 (+)
LOC110535264 LOC106579657 coding upstream 111398 11178332 ~ 11497838 (+)
trnaa-ugc-48 NA coding upstream 273651 11335510 ~ 11335585 (+)
LOC110535263 lrrc30 coding upstream 450841 11155680 ~ 11158395 (+)
LOC110535274 LOC100136506 coding downstream 187867 11798079 ~ 11885766 (+)
LOC110535275 NA coding downstream 470051 12080263 ~ 12080894 (+)
LOC110535276 LOC106579583 coding downstream 566701 12176913 ~ 12191408 (+)
LOC110535277 LOC106579584 coding downstream 583193 12193405 ~ 12246357 (+)
LOC110535283 LOC106579606 coding downstream 654853 12265065 ~ 12274786 (+)
G943158 NA non-coding upstream 40188 11568793 ~ 11569048 (+)
G943044 NA non-coding upstream 230765 11376506 ~ 11378471 (+)
G943032 NA non-coding upstream 266802 11342090 ~ 11342434 (+)
G942921 NA non-coding upstream 364778 11164136 ~ 11244458 (+)
G943186 NA non-coding downstream 7545 11617757 ~ 11618092 (+)
G943586 NA non-coding downstream 144481 11754693 ~ 11754932 (+)
G943593 NA non-coding downstream 148641 11758853 ~ 11759228 (+)
G943604 NA non-coding downstream 167235 11777447 ~ 11779127 (+)
G943634 NA non-coding downstream 220407 11830619 ~ 11831170 (+)
G942702 NA other upstream 497900 11110726 ~ 11111336 (+)
G941893 NA other upstream 1363730 10245109 ~ 10245506 (+)
LOC118937463 NA other upstream 2753799 8845565 ~ 8855476 (+)
G940376 NA other upstream 2956715 8651504 ~ 8652993 (+)
G940313 NA other upstream 3068369 8532540 ~ 8540867 (+)
G944957 NA other downstream 1777338 13387550 ~ 13394875 (+)
G946426 ramp3 other downstream 2454336 14064548 ~ 14065869 (+)
LOC110535304 NA other downstream 2545142 14154784 ~ 14202999 (+)
G946644 NA other downstream 2700363 14310575 ~ 14314318 (+)
G946643 NA other downstream 2707796 14318008 ~ 14318623 (+)

Expression


Co-expression Network