G943653


Basic Information

Item Value
gene id G943653
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 11907416 ~ 11908721 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1076171
aaataagaagtggtagcatctaaataagaagtggtagcaTCCCAAAAAGAAGTGGTAGCATCTAAATAATaagtggTAGTATCTAAATAAGCagtggtagtatctaaataagaagtggtaaCAACTGAATAAGAAGTGGTAACAACTGaataagaagtggtagtatctaaataagaagtggtagcaTCCCAAAaagaagtggtagtatctaaataagaagtggtagcatctaaataagaagtggtagcaTCCCAAAaagaagtggtagtatctaaataagaagtggtag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1076171 True 289 lncRNA 0.34 2 11907416 11908721

Neighbor

gene id symbol gene type direction distance location
LOC110535274 LOC100136506 coding upstream 21650 11798079 ~ 11885766 (+)
LOC110535272 LOC106579661 coding upstream 359176 11545457 ~ 11548240 (+)
LOC110535269 LOC106579659 coding upstream 365918 11499972 ~ 11541498 (+)
LOC110535264 LOC106579657 coding upstream 409578 11178332 ~ 11497838 (+)
LOC110535275 NA coding downstream 171542 12080263 ~ 12080894 (+)
LOC110535276 LOC106579583 coding downstream 268192 12176913 ~ 12191408 (+)
LOC110535277 LOC106579584 coding downstream 284684 12193405 ~ 12246357 (+)
LOC110535283 LOC106579606 coding downstream 356344 12265065 ~ 12274786 (+)
LOC110535281 riok3 coding downstream 366561 12275282 ~ 12283258 (+)
G943615 NA non-coding upstream 16242 11889563 ~ 11891174 (+)
G943616 NA non-coding upstream 17944 11887634 ~ 11889472 (+)
G943634 NA non-coding upstream 76246 11830619 ~ 11831170 (+)
G943604 NA non-coding upstream 128289 11777447 ~ 11779127 (+)
G943593 NA non-coding upstream 148188 11758853 ~ 11759228 (+)
G943661 NA non-coding downstream 8259 11916980 ~ 11917189 (+)
G943662 NA non-coding downstream 9910 11918631 ~ 11919023 (+)
G943710 NA non-coding downstream 70460 11979181 ~ 11979592 (+)
G943713 LOC106590371 non-coding downstream 73136 11981857 ~ 11991290 (+)
G943748 NA non-coding downstream 145181 12053902 ~ 12054193 (+)
G942702 NA other upstream 796080 11110726 ~ 11111336 (+)
G941893 NA other upstream 1661910 10245109 ~ 10245506 (+)
LOC118937463 NA other upstream 3051979 8845565 ~ 8855476 (+)
G940376 NA other upstream 3254895 8651504 ~ 8652993 (+)
G940313 NA other upstream 3366549 8532540 ~ 8540867 (+)
G944957 NA other downstream 1478829 13387550 ~ 13394875 (+)
G946426 ramp3 other downstream 2155827 14064548 ~ 14065869 (+)
LOC110535304 NA other downstream 2246633 14154784 ~ 14202999 (+)
G946644 NA other downstream 2401854 14310575 ~ 14314318 (+)
G946643 NA other downstream 2409287 14318008 ~ 14318623 (+)

Expression


Co-expression Network