Gene
RNA
| Item | Value |
|---|---|
| gene id | G943710 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 11979181 ~ 11979592 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1076228 | True | 412 | lncRNA | 0.46 | 1 | 11979181 | 11979592 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535274 | LOC100136506 | coding | upstream | 93415 | 11798079 ~ 11885766 (+) |
| LOC110535272 | LOC106579661 | coding | upstream | 430941 | 11545457 ~ 11548240 (+) |
| LOC110535269 | LOC106579659 | coding | upstream | 437683 | 11499972 ~ 11541498 (+) |
| LOC110535264 | LOC106579657 | coding | upstream | 481343 | 11178332 ~ 11497838 (+) |
| LOC110535275 | NA | coding | downstream | 100671 | 12080263 ~ 12080894 (+) |
| LOC110535276 | LOC106579583 | coding | downstream | 197321 | 12176913 ~ 12191408 (+) |
| LOC110535277 | LOC106579584 | coding | downstream | 213813 | 12193405 ~ 12246357 (+) |
| LOC110535283 | LOC106579606 | coding | downstream | 285473 | 12265065 ~ 12274786 (+) |
| LOC110535281 | riok3 | coding | downstream | 295690 | 12275282 ~ 12283258 (+) |
| G943662 | NA | non-coding | upstream | 60158 | 11918631 ~ 11919023 (+) |
| G943661 | NA | non-coding | upstream | 61992 | 11916980 ~ 11917189 (+) |
| G943653 | NA | non-coding | upstream | 70460 | 11907416 ~ 11908721 (+) |
| G943615 | NA | non-coding | upstream | 88007 | 11889563 ~ 11891174 (+) |
| G943616 | NA | non-coding | upstream | 89709 | 11887634 ~ 11889472 (+) |
| G943713 | LOC106590371 | non-coding | downstream | 2265 | 11981857 ~ 11991290 (+) |
| G943748 | NA | non-coding | downstream | 74310 | 12053902 ~ 12054193 (+) |
| G943749 | NA | non-coding | downstream | 74943 | 12054535 ~ 12054922 (+) |
| G943750 | NA | non-coding | downstream | 75548 | 12055140 ~ 12055517 (+) |
| G943785 | NA | non-coding | downstream | 135235 | 12114827 ~ 12115161 (+) |
| G942702 | NA | other | upstream | 867845 | 11110726 ~ 11111336 (+) |
| G941893 | NA | other | upstream | 1733675 | 10245109 ~ 10245506 (+) |
| LOC118937463 | NA | other | upstream | 3123744 | 8845565 ~ 8855476 (+) |
| G940376 | NA | other | upstream | 3326660 | 8651504 ~ 8652993 (+) |
| G940313 | NA | other | upstream | 3438314 | 8532540 ~ 8540867 (+) |
| G944957 | NA | other | downstream | 1407958 | 13387550 ~ 13394875 (+) |
| G946426 | ramp3 | other | downstream | 2084956 | 14064548 ~ 14065869 (+) |
| LOC110535304 | NA | other | downstream | 2175762 | 14154784 ~ 14202999 (+) |
| G946644 | NA | other | downstream | 2330983 | 14310575 ~ 14314318 (+) |
| G946643 | NA | other | downstream | 2338416 | 14318008 ~ 14318623 (+) |
