Gene
RNA
| Item | Value |
|---|---|
| gene id | G943785 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 12114827 ~ 12115161 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1076309 | True | 225 | lncRNA | 0.48 | 2 | 12114827 | 12115161 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535275 | NA | coding | upstream | 33933 | 12080263 ~ 12080894 (+) |
| LOC110535274 | LOC100136506 | coding | upstream | 229061 | 11798079 ~ 11885766 (+) |
| LOC110535272 | LOC106579661 | coding | upstream | 566587 | 11545457 ~ 11548240 (+) |
| LOC110535269 | LOC106579659 | coding | upstream | 573329 | 11499972 ~ 11541498 (+) |
| LOC110535264 | LOC106579657 | coding | upstream | 616989 | 11178332 ~ 11497838 (+) |
| LOC110535276 | LOC106579583 | coding | downstream | 61752 | 12176913 ~ 12191408 (+) |
| LOC110535277 | LOC106579584 | coding | downstream | 78244 | 12193405 ~ 12246357 (+) |
| LOC110535283 | LOC106579606 | coding | downstream | 149904 | 12265065 ~ 12274786 (+) |
| LOC110535281 | riok3 | coding | downstream | 160121 | 12275282 ~ 12283258 (+) |
| rmc1 | mic1 | coding | downstream | 168720 | 12283881 ~ 12295047 (+) |
| G943750 | NA | non-coding | upstream | 59310 | 12055140 ~ 12055517 (+) |
| G943749 | NA | non-coding | upstream | 59905 | 12054535 ~ 12054922 (+) |
| G943748 | NA | non-coding | upstream | 60634 | 12053902 ~ 12054193 (+) |
| G943713 | LOC106590371 | non-coding | upstream | 123537 | 11981857 ~ 11991290 (+) |
| G943710 | NA | non-coding | upstream | 135235 | 11979181 ~ 11979592 (+) |
| G943787 | NA | non-coding | downstream | 1918 | 12117079 ~ 12122615 (+) |
| G943817 | NA | non-coding | downstream | 49107 | 12164268 ~ 12164536 (+) |
| G943820 | LOC106583515 | non-coding | downstream | 53838 | 12168999 ~ 12169446 (+) |
| G943827 | LOC106579585 | non-coding | downstream | 136819 | 12251980 ~ 12252197 (+) |
| G943829 | NA | non-coding | downstream | 137085 | 12252246 ~ 12253319 (+) |
| G942702 | NA | other | upstream | 1003491 | 11110726 ~ 11111336 (+) |
| G941893 | NA | other | upstream | 1869321 | 10245109 ~ 10245506 (+) |
| LOC118937463 | NA | other | upstream | 3259390 | 8845565 ~ 8855476 (+) |
| G940376 | NA | other | upstream | 3462306 | 8651504 ~ 8652993 (+) |
| G940313 | NA | other | upstream | 3573960 | 8532540 ~ 8540867 (+) |
| G944957 | NA | other | downstream | 1272389 | 13387550 ~ 13394875 (+) |
| G946426 | ramp3 | other | downstream | 1949387 | 14064548 ~ 14065869 (+) |
| LOC110535304 | NA | other | downstream | 2040193 | 14154784 ~ 14202999 (+) |
| G946644 | NA | other | downstream | 2195414 | 14310575 ~ 14314318 (+) |
| G946643 | NA | other | downstream | 2202847 | 14318008 ~ 14318623 (+) |
