G943877


Basic Information

Item Value
gene id G943877
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 12319776 ~ 12343587 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1076424
GAGGAGCTAGGACATAGGAATGGTGGAAGGGAAGCCACTGCAAACAATGTGTTATAATTGAACCCTCCATCTCCTCACCTTGAGGAAGGAGAGGTCGTGGTAGTCCTGGATGTAGGTAAGCTCTAGGTTCTCCAGGACCACAGTACAGTTGCTGTACATCCTCACCAGGTTGTTGTAGTGGTCGTCTACAGTCCCCAGCAGCGTCAGCCTGTTGCTGATCCCCTGACACTTTCTTGTCCGCTGTCAGTGTCATGCTGCAGCCCAGGCTGAACAAGGCAGCAATAACTATTCCACTTCCAGGTCGCATTGTTTCCAAAATGTGTTATATTCAATGAAATTGCAGGAGAAACTTGTCCATAGTCTTGGGCGAACAATACTAAGTTTGTGTGATGTATCTACCCCCGTTTTACGTCCAGGGGGAGGTAATAGGTGTAGCCTGTTTGGGTGGGACTTAGTTGCGCTGGCACTCTCTCTTTTCCC

Function

NR:

description
melanoma receptor tyrosine-protein kinase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1076424 True 480 lncRNA 0.49 2 12319776 12343587

Neighbor

gene id symbol gene type direction distance location
rmc1 mic1 coding upstream 24729 12283881 ~ 12295047 (+)
LOC110535281 riok3 coding upstream 36518 12275282 ~ 12283258 (+)
LOC110535283 LOC106579606 coding upstream 44990 12265065 ~ 12274786 (+)
LOC110535277 LOC106579584 coding upstream 73419 12193405 ~ 12246357 (+)
LOC110535276 LOC106579583 coding upstream 128368 12176913 ~ 12191408 (+)
LOC110535284 LOC106579588 coding downstream 26491 12370078 ~ 12384286 (+)
LOC110535285 LOC106579590 coding downstream 49786 12393373 ~ 12400089 (+)
LOC110536550 LOC106579608 coding downstream 421039 12764626 ~ 12794372 (+)
LOC110535287 LOC106579593 coding downstream 463989 12807576 ~ 12877501 (+)
LOC110535289 LOC106579598 coding downstream 583024 12926611 ~ 12927478 (+)
G943829 NA non-coding upstream 66457 12252246 ~ 12253319 (+)
G943827 LOC106579585 non-coding upstream 67579 12251980 ~ 12252197 (+)
G943820 LOC106583515 non-coding upstream 150330 12168999 ~ 12169446 (+)
G943817 NA non-coding upstream 155240 12164268 ~ 12164536 (+)
G943787 NA non-coding upstream 197161 12117079 ~ 12122615 (+)
G944232 NA non-coding downstream 36863 12380450 ~ 12381622 (+)
G944423 NA non-coding downstream 283013 12626600 ~ 12626805 (+)
G944512 NA non-coding downstream 395284 12738871 ~ 12739358 (+)
G944513 NA non-coding downstream 396394 12739981 ~ 12740224 (+)
G944560 NA non-coding downstream 557079 12900666 ~ 12902175 (+)
G942702 NA other upstream 1208440 11110726 ~ 11111336 (+)
G941893 NA other upstream 2074270 10245109 ~ 10245506 (+)
LOC118937463 NA other upstream 3464339 8845565 ~ 8855476 (+)
G940376 NA other upstream 3667255 8651504 ~ 8652993 (+)
G940313 NA other upstream 3778909 8532540 ~ 8540867 (+)
G944957 NA other downstream 1043963 13387550 ~ 13394875 (+)
G946426 ramp3 other downstream 1720961 14064548 ~ 14065869 (+)
LOC110535304 NA other downstream 1811767 14154784 ~ 14202999 (+)
G946644 NA other downstream 1966988 14310575 ~ 14314318 (+)
G946643 NA other downstream 1974421 14318008 ~ 14318623 (+)

Expression


Co-expression Network