XLOC_028598 (mgst1.1)


Basic Information

Item Value
gene id XLOC_028598
gene name mgst1.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 12715695 ~ 12718367 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055466
GACACGCCCACCTTCACGCGTTAGTTCAGGAGTGAAAAGCTGTGAAAGCAAAGCAGAGAGGCGACAAAAGGTTTAAACTAAGATGGCAGAAGTTGTGCACATGATCGACAGTGAGGTCTTTCTGGCCTTCTCCACATACGCAACCATAGTCATCCTCAAAATGATGCTCATGAGCCTCATGACCTCTTACCTGCGATTGACAAAACAGGTCTTCTCCAACTTGGAGGACACCGCCATGGCAATAGCAGAAGACAAGAAAAAACTGGTTAGGACTGATCCAGATGTGGAAAGAGTGCGACGATGCCATCTGAATGACCTGGAAAGCATCGTTCCTTTTGTGGTGATCGGTCTTCTGTATGCACTGACGGGGCCGGTTCTCTCCACTGCTCTTTTGCACTTCCGGGTGTTTGTAGTGTCCCGATTCATCCATACAGTCGCGTACATAATGGCTCTTCCGCAACCTACCAGAGGTGTAGCCTTTGGCGTAGGGCTGCTTACAACTTTATCTATGGCCTACAGGGTGCTCACTACTGCTCTTTTTCTTTAATGAATAACACTCGTTCATATACagctcaagtcagaattattccccccccccctgtttatttttccccccaatttctgtttaacagagagaagactttttttcagcacatttctaaacataatagttttaataactcatctctaataactgatttattttatatttgccatgatgacagtaaataatattttactagataaagactcttccatacagcttaaagtgacgtttaaaggtttaaccaggttaattgggtcaactaggcaggttagagtgattaggcaagttattgtgtaacgatagTTTGTTTAGGCAATAAAtaaagtagcttaaaggggcttaacaattttgaccttaaaatggtttttaaaaatttaaatctgcttctattctagctgg
>TCONS_00055467
AACTGGTAAAACTGGCTGTGTGCAGTATAGAAGTTATGCAAGATCTGTAGTAGTCAGTATCAGGTATGAAATGATGCATCTGTGAGACTGTTGCATGCGATTTTCTGCATTAAAAGCAATGCAAATGAATAATGTTTGTGTAATTTATTGTTTGGTGTTTATCTGCAGTTTAAACTAAGATGGCAGAAGTTGTGCACATGATCGACAGTGAGGTCTTTCTGGCCTTCTCCACATACGCAACCATAGTCATCCTCAAAATGATGCTCATGAGCCTCATGACCTCTTACCTGCGATTGACAAAACAGGTCTTCTCCAACTTGGAGGACACCGCCATGGCAATAGCAGAAGACAAGAAAAAACTGGTTAGGACTGATCCAGATGTGGAAAGAGTGCGACGGTAAACTTCTATTTGTTAAACTGCACAATCACTGGGTGATCTCCTCCTCATGTTTTTGTTCTTGAATCCCAGATGCCATCTGAATGACCTGGAAAGCATCGTTCCTTTTGTGGTGATCGGTCTTCTGTATGCACTGACGGGGCCGGTTCTCTCCACTGCTCTTTTGCACTTCCGGGTGTTTGTAGTGTCCCGATTCATCCATACAGTCGCGTACATAATGGCTCTTCCGCAACCTACCAGAGGTGTAGCCTTTGGCGTAGGGCTGCTTACAACTTTATCTATGGCCTACAGGGTGCTCACTACTGCTCTTTTTCTTTAATGAATAACACTCGTTCATATACagctcaagtcagaattattccccccccccctgtttatttttccccccaatttctgtttaacagagagaagactttttttcagcacatttctaaacataatagttttaataactcatctctaataactgatttattttatatttgccatga
>TCONS_00055468
caaatcgaCGAATGAGTGCGAAAACTAGTGAAGTGACAATATTAAACGCCAGCAATGTTAGATGCTTTCAATTCTGCGACGTGAAAAATCAGAAAACAAGCGAATTTGCTTGGTTTCTGTTACAGGACTTTAGGACAGAAACTGAGCTGTAAGCTGTTAATAAAGTACAACGGAATGATTTCTATAGCAGTTAGTCCAATTCTGGTAACGTAAACAAAGTAAATAGGCTATAACTCTAGTTTTATTTTAGAGCTTGAGCTTTGTGATTGAAATGATGCAGAAAAATCCTGTTTAAACTGGCTGCTTTTCTGAAACTTTGTAACCTATAGCTGCCAAGTGTGGTTTTTTCTAAACTGGTAAAACTGGCTGTGTGCAGTATAGAAGTTATGCAAGATCTGTAGTAGTCAGTATCAGGTATGAAATGATGCATCTGTGAGACTGTTGCATGCGATTTTCTGCATTAAAAGCAATGCAAATGAATAATGTTTGTGTAATTTATTGTTTGGTGTTTATCTGCAGTTTAAACTAAGATGGCAGAAGTTGTGCACATGATCGACAGTGAGGTCTTTCTGGCCTTCTCCACATACGCAACCATAGTCATCCTCAAAATGATGCTCATGAGCCTCATGACCTCTTACCTGCGATTGACAAAACAGGTCTTCTCCAACTTGGAGGACACCGCCATGGCAATAGCAGAAGACAAGAAAAAACTGGTTAGGACTGATCCAGATGTGGAAAGAGTGCGACGATGCCATCTGAATGACCTGGAAAGCATCGTTCCTTTTGTGGTGATCGGTCTTCTGTATGCACTGACGGGGCCGGTTCTCTCCACTGCTCTTTTGCACTTCCGGGTGTTTGTAGT

Function

symbol description
mgst1.1 Predicted to enable glutathione transferase activity. Acts upstream of or within hematopoietic progenitor cell differentiation. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in mitochondrion. Is expressed in brain; gill; hematopoietic system; liver; and pleuroperitoneal region. Orthologous to human MGST1 (microsomal glutathione S-transferase 1).

GO:

id name namespace
GO:0030097 hemopoiesis biological_process
GO:0002244 hematopoietic progenitor cell differentiation biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005739 mitochondrion cellular_component
GO:0016740 transferase activity molecular_function
GO:0004364 glutathione transferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041010-30 Predicted to enable glutathione transferase activity. Acts upstream of or within hematopoietic progenitor cell differentiation. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in mitochondrion. Is expressed in brain; gill; hematopoietic system; liver; and pleuroperitoneal region. Orthologous to human MGST1 (microsomal glutathione S-transferase 1).

Ensembl:

ensembl_id ENSDARG00000032618

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055466 False 946 mRNA 0.42 4 12715695 12718367
TCONS_00055467 False 888 lncRNA 0.42 2 12715922 12717752
TCONS_00055468 True 862 mRNA 0.41 3 12716227 12718103

Neighbor

gene id symbol gene type direction distance location
XLOC_028597 AL844512.1 coding downstream 119891 12595680 ~ 12595804 (-)
XLOC_028596 arhgef39 coding downstream 238417 12401146 ~ 12477278 (-)
XLOC_028595 rergla coding downstream 327160 12381735 ~ 12388535 (-)
XLOC_028594 il17ra1a coding downstream 392467 12317461 ~ 12323228 (-)
XLOC_028593 NA coding downstream 418245 12288765 ~ 12297450 (-)
XLOC_028599 mgst1.2 coding upstream 598 12718965 ~ 12725513 (-)
XLOC_028600 NA coding upstream 22995 12741362 ~ 12744353 (-)
XLOC_028601 dera coding upstream 36769 12755136 ~ 12766418 (-)
XLOC_028602 helb coding upstream 51584 12769951 ~ 12781182 (-)
XLOC_028603 irak3 coding upstream 63767 12782134 ~ 12795489 (-)
XLOC_028591 NA non-coding downstream 474122 12240134 ~ 12241573 (-)
XLOC_028590 NA non-coding downstream 476884 12230026 ~ 12238811 (-)
XLOC_028589 CR792454.1 non-coding downstream 490870 12122794 ~ 12224825 (-)
XLOC_028605 BX119963.4 non-coding upstream 155615 12873982 ~ 12883327 (-)
XLOC_028609 NA non-coding upstream 270611 12988978 ~ 12989698 (-)
XLOC_028611 NA non-coding upstream 305140 13023507 ~ 13024168 (-)
XLOC_028613 NA non-coding upstream 627305 13345672 ~ 13393170 (-)

Expression


Co-expression Network