G944609


Basic Information

Item Value
gene id G944609
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 12912440 ~ 12919262 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1077247
agaaggagcagcggggagggaggtgggtacaggtagaacagaaggagcagcggtgagggaggtgggtacaggtagaacagaaggagcagcggtgagggaggtgggtacaggtagaacagaaggagcagcggggagggtggtgggtacaggtagaacagaaggagcagaggggagggagggaggtacaggtagaacagaaggagcagcggggagggagggaggtacaggtagaacagaaggagcagcggggagggagggaggtacaggtagaacagaaggagcagcagggagggaggtgggtacaggtagaacagaaggagcagcggggagggaggtgggtacaggtagaacagaaggagcagcggggagggagggaggtacaggtagaacagaaggagcagcggggagggagggaggtggtgggtacaggtagaacagaaggagcagcggggagtgagggaggtgggtacaggtagaacagaaggagcagggggagggaggtgggtacaggtagaacagaaggagcagcagggagggaggtgggtacaggtagaacagaaggagcagcggggagggagggaggtggtgggtacaggtagaacagaaggagcagcagggag

Function

NR:

description
PREDICTED: uncharacterized protein LOC106584648

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1077247 True 620 lncRNA 0.61 2 12912440 12919262

Neighbor

gene id symbol gene type direction distance location
LOC110535287 LOC106579593 coding upstream 34939 12807576 ~ 12877501 (+)
LOC110536550 LOC106579608 coding upstream 118068 12764626 ~ 12794372 (+)
LOC110535285 LOC106579590 coding upstream 512351 12393373 ~ 12400089 (+)
LOC110535284 LOC106579588 coding upstream 528154 12370078 ~ 12384286 (+)
rmc1 mic1 coding upstream 617393 12283881 ~ 12295047 (+)
LOC110535289 LOC106579598 coding downstream 7349 12926611 ~ 12927478 (+)
LOC110535293 LOC106579603 coding downstream 127044 13046306 ~ 13094507 (+)
dpp6a LOC106579565 coding downstream 527422 13446684 ~ 13814449 (+)
LOC118937473 NA coding downstream 797465 13716727 ~ 13716783 (+)
mcur1 mcur1 coding downstream 904722 13823984 ~ 13848726 (+)
G944560 NA non-coding upstream 10265 12900666 ~ 12902175 (+)
G944513 NA non-coding upstream 172216 12739981 ~ 12740224 (+)
G944512 NA non-coding upstream 173082 12738871 ~ 12739358 (+)
G944423 NA non-coding upstream 285635 12626600 ~ 12626805 (+)
G944232 NA non-coding upstream 530818 12380450 ~ 12381622 (+)
G944679 NA non-coding downstream 107925 13027187 ~ 13121153 (+)
G944714 NA non-coding downstream 165130 13084392 ~ 13084665 (+)
G944675 LOC106579599 non-coding downstream 197360 13116622 ~ 13118471 (+)
G944876 NA non-coding downstream 369162 13288424 ~ 13291231 (+)
G945040 NA non-coding downstream 564411 13483673 ~ 13483980 (+)
G942702 NA other upstream 1801104 11110726 ~ 11111336 (+)
G941893 NA other upstream 2666934 10245109 ~ 10245506 (+)
LOC118937463 NA other upstream 4057003 8845565 ~ 8855476 (+)
G940376 NA other upstream 4259919 8651504 ~ 8652993 (+)
G940313 NA other upstream 4371573 8532540 ~ 8540867 (+)
G944957 NA other downstream 468288 13387550 ~ 13394875 (+)
G946426 ramp3 other downstream 1145286 14064548 ~ 14065869 (+)
LOC110535304 NA other downstream 1236092 14154784 ~ 14202999 (+)
G946644 NA other downstream 1391313 14310575 ~ 14314318 (+)
G946643 NA other downstream 1398746 14318008 ~ 14318623 (+)

Expression


Co-expression Network