G944714


Basic Information

Item Value
gene id G944714
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 13084392 ~ 13084665 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1077360
GAGcctcaaaattgagttcaggtgcatcctgtttccattgatcatccttgatgtttctacaatttgattgaagtccacctggggtaaattccattgattggacatgatttggaaaggcacacacctgtctttataaggtcccacagttgacagtacatgttagagcaaaaaccaagccatgaggtcgaaggaattatccatagagctccgagacaggattgtgtcaaggcacagat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1077360 True 236 lncRNA 0.43 2 13084392 13084665

Neighbor

gene id symbol gene type direction distance location
LOC110535289 LOC106579598 coding upstream 156914 12926611 ~ 12927478 (+)
LOC110535287 LOC106579593 coding upstream 206891 12807576 ~ 12877501 (+)
LOC110536550 LOC106579608 coding upstream 290020 12764626 ~ 12794372 (+)
LOC110535285 LOC106579590 coding upstream 684303 12393373 ~ 12400089 (+)
LOC110535284 LOC106579588 coding upstream 700106 12370078 ~ 12384286 (+)
dpp6a LOC106579565 coding downstream 362019 13446684 ~ 13814449 (+)
LOC118937473 NA coding downstream 632062 13716727 ~ 13716783 (+)
mcur1 mcur1 coding downstream 739319 13823984 ~ 13848726 (+)
LOC110535301 LOC106579559 coding downstream 792136 13876801 ~ 13883235 (+)
LOC110535303 nebl coding downstream 1036735 14121400 ~ 14207555 (+)
G944609 NA non-coding upstream 165130 12912440 ~ 12919262 (+)
G944560 NA non-coding upstream 182217 12900666 ~ 12902175 (+)
G944513 NA non-coding upstream 344168 12739981 ~ 12740224 (+)
G944512 NA non-coding upstream 345034 12738871 ~ 12739358 (+)
G944423 NA non-coding upstream 457587 12626600 ~ 12626805 (+)
G944675 LOC106579599 non-coding downstream 31957 13116622 ~ 13118471 (+)
G944876 NA non-coding downstream 203759 13288424 ~ 13291231 (+)
G945040 NA non-coding downstream 399008 13483673 ~ 13483980 (+)
G945043 NA non-coding downstream 403813 13488478 ~ 13488711 (+)
G945046 NA non-coding downstream 406555 13491220 ~ 13491487 (+)
G942702 NA other upstream 1973056 11110726 ~ 11111336 (+)
G941893 NA other upstream 2838886 10245109 ~ 10245506 (+)
LOC118937463 NA other upstream 4228955 8845565 ~ 8855476 (+)
G940376 NA other upstream 4431871 8651504 ~ 8652993 (+)
G940313 NA other upstream 4543525 8532540 ~ 8540867 (+)
G944957 NA other downstream 302885 13387550 ~ 13394875 (+)
G946426 ramp3 other downstream 979883 14064548 ~ 14065869 (+)
LOC110535304 NA other downstream 1070689 14154784 ~ 14202999 (+)
G946644 NA other downstream 1225910 14310575 ~ 14314318 (+)
G946643 NA other downstream 1233343 14318008 ~ 14318623 (+)

Expression


Co-expression Network