G944957


Basic Information

Item Value
gene id G944957
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 13387550 ~ 13394875 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1077607
aaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagtgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaaaaagtttaaagccggatttggatacaaaaatatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaagtgtcgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggtgtaaaagcaacacagctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacattgatccaaaacataaagcaaaatctacaatggaatggttcaaaaataaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatcc

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1077607 True 980 TUCP 0.43 2 13387550 13394875

Neighbor

gene id symbol gene type direction distance location
LOC110535293 LOC106579603 coding upstream 293043 13046306 ~ 13094507 (+)
LOC110535289 LOC106579598 coding upstream 460072 12926611 ~ 12927478 (+)
LOC110535287 LOC106579593 coding upstream 510049 12807576 ~ 12877501 (+)
LOC110536550 LOC106579608 coding upstream 593178 12764626 ~ 12794372 (+)
LOC110535285 LOC106579590 coding upstream 987461 12393373 ~ 12400089 (+)
dpp6a LOC106579565 coding downstream 51809 13446684 ~ 13814449 (+)
LOC118937473 NA coding downstream 321852 13716727 ~ 13716783 (+)
mcur1 mcur1 coding downstream 429109 13823984 ~ 13848726 (+)
LOC110535301 LOC106579559 coding downstream 481926 13876801 ~ 13883235 (+)
LOC110535303 nebl coding downstream 726525 14121400 ~ 14207555 (+)
G944876 NA non-coding upstream 96319 13288424 ~ 13291231 (+)
G944679 NA non-coding upstream 266397 13027187 ~ 13121153 (+)
G944675 LOC106579599 non-coding upstream 269079 13116622 ~ 13118471 (+)
G944714 NA non-coding upstream 302885 13084392 ~ 13084665 (+)
G944609 NA non-coding upstream 468288 12912440 ~ 12919262 (+)
G945040 NA non-coding downstream 88798 13483673 ~ 13483980 (+)
G945043 NA non-coding downstream 93603 13488478 ~ 13488711 (+)
G945046 NA non-coding downstream 96345 13491220 ~ 13491487 (+)
G945052 NA non-coding downstream 102643 13497518 ~ 13497884 (+)
G945200 NA non-coding downstream 278432 13673307 ~ 13673574 (+)
G942702 NA other upstream 2276214 11110726 ~ 11111336 (+)
G941893 NA other upstream 3142044 10245109 ~ 10245506 (+)
LOC118937463 NA other upstream 4532113 8845565 ~ 8855476 (+)
G940376 NA other upstream 4735029 8651504 ~ 8652993 (+)
G940313 NA other upstream 4846683 8532540 ~ 8540867 (+)
G946426 ramp3 other downstream 669673 14064548 ~ 14065869 (+)
LOC110535304 NA other downstream 760479 14154784 ~ 14202999 (+)
G946644 NA other downstream 915700 14310575 ~ 14314318 (+)
G946643 NA other downstream 923133 14318008 ~ 14318623 (+)
G946642 LOC106590417 other downstream 923790 14318665 ~ 14329336 (+)

Expression


Co-expression Network