Gene
RNA
| Item | Value |
|---|---|
| gene id | G946372 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 14002334 ~ 14002603 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC109894116 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1079124 | True | 270 | lncRNA | 0.44 | 1 | 14002334 | 14002603 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535301 | LOC106579559 | coding | upstream | 119099 | 13876801 ~ 13883235 (+) |
| mcur1 | mcur1 | coding | upstream | 153608 | 13823984 ~ 13848726 (+) |
| dpp6a | LOC106579565 | coding | upstream | 187885 | 13446684 ~ 13814449 (+) |
| LOC118937473 | NA | coding | upstream | 285551 | 13716727 ~ 13716783 (+) |
| LOC110535293 | LOC106579603 | coding | upstream | 907827 | 13046306 ~ 13094507 (+) |
| LOC110535303 | nebl | coding | downstream | 118797 | 14121400 ~ 14207555 (+) |
| LOC110535304 | NA | coding | downstream | 152181 | 14154784 ~ 14202999 (+) |
| LOC118937467 | NA | coding | downstream | 206547 | 14209150 ~ 14210346 (+) |
| ssr1 | ssr1 | coding | downstream | 209812 | 14212415 ~ 14220500 (+) |
| LOC118936448 | NA | coding | downstream | 316139 | 14318742 ~ 14321570 (+) |
| G946371 | NA | non-coding | upstream | 172 | 14001843 ~ 14002162 (+) |
| G946357 | NA | non-coding | upstream | 8762 | 13993319 ~ 13993572 (+) |
| G946304 | NA | non-coding | upstream | 49638 | 13952474 ~ 13952696 (+) |
| G946280 | NA | non-coding | upstream | 67058 | 13935052 ~ 13935276 (+) |
| G946278 | NA | non-coding | upstream | 70436 | 13931687 ~ 13931898 (+) |
| G946374 | NA | non-coding | downstream | 577 | 14003180 ~ 14003477 (+) |
| G946377 | NA | non-coding | downstream | 4003 | 14006606 ~ 14007317 (+) |
| G946390 | NA | non-coding | downstream | 16721 | 14019324 ~ 14019760 (+) |
| G946545 | NA | non-coding | downstream | 109690 | 14112293 ~ 14112513 (+) |
| G946549 | NA | non-coding | downstream | 111480 | 14114083 ~ 14114567 (+) |
| G944957 | NA | other | upstream | 607459 | 13387550 ~ 13394875 (+) |
| G942702 | NA | other | upstream | 2890998 | 11110726 ~ 11111336 (+) |
| G941893 | NA | other | upstream | 3756828 | 10245109 ~ 10245506 (+) |
| LOC118937463 | NA | other | upstream | 5146897 | 8845565 ~ 8855476 (+) |
| G940376 | NA | other | upstream | 5349813 | 8651504 ~ 8652993 (+) |
| G946426 | ramp3 | other | downstream | 61945 | 14064548 ~ 14065869 (+) |
| G946644 | NA | other | downstream | 307972 | 14310575 ~ 14314318 (+) |
| G946643 | NA | other | downstream | 315405 | 14318008 ~ 14318623 (+) |
| G946642 | LOC106590417 | other | downstream | 316062 | 14318665 ~ 14329336 (+) |
