G946374


Basic Information

Item Value
gene id G946374
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 14003180 ~ 14003477 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1079126
GTATGTTATTAAATTGCAAACTGAGTATAAAACAGTGAGTTGTGTTTACAGTTTTGCAAAAAGTGTGTTATAAAATTACAAAAAGTGTAAAGCAGAGAACGTGCATTCAGTTTGGCACACTTGGTAAATGCATTGGCTACAAGTGTTAATGGTTTCAGAGATAGTGCTTCAAGAATCACTGTTAGTGTTTAAGTATTCAGAATAAACTGCAATAGAGAGACTTCCTTTAGGAACAAGACACAGAGCCAAGTCCTGCCCTCTGTAGAACCCCCCAAAGGATCTTCCCATAGCATTACTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1079126 True 298 lncRNA 0.37 1 14003180 14003477

Neighbor

gene id symbol gene type direction distance location
LOC110535301 LOC106579559 coding upstream 119945 13876801 ~ 13883235 (+)
mcur1 mcur1 coding upstream 154454 13823984 ~ 13848726 (+)
dpp6a LOC106579565 coding upstream 188731 13446684 ~ 13814449 (+)
LOC118937473 NA coding upstream 286397 13716727 ~ 13716783 (+)
LOC110535293 LOC106579603 coding upstream 908673 13046306 ~ 13094507 (+)
LOC110535303 nebl coding downstream 117923 14121400 ~ 14207555 (+)
LOC110535304 NA coding downstream 151307 14154784 ~ 14202999 (+)
LOC118937467 NA coding downstream 205673 14209150 ~ 14210346 (+)
ssr1 ssr1 coding downstream 208938 14212415 ~ 14220500 (+)
LOC118936448 NA coding downstream 315265 14318742 ~ 14321570 (+)
G946372 NA non-coding upstream 577 14002334 ~ 14002603 (+)
G946371 NA non-coding upstream 1018 14001843 ~ 14002162 (+)
G946357 NA non-coding upstream 9608 13993319 ~ 13993572 (+)
G946304 NA non-coding upstream 50484 13952474 ~ 13952696 (+)
G946280 NA non-coding upstream 67904 13935052 ~ 13935276 (+)
G946377 NA non-coding downstream 3129 14006606 ~ 14007317 (+)
G946390 NA non-coding downstream 15847 14019324 ~ 14019760 (+)
G946545 NA non-coding downstream 108816 14112293 ~ 14112513 (+)
G946549 NA non-coding downstream 110606 14114083 ~ 14114567 (+)
G946616 NA non-coding downstream 236359 14239836 ~ 14240314 (+)
G944957 NA other upstream 608305 13387550 ~ 13394875 (+)
G942702 NA other upstream 2891844 11110726 ~ 11111336 (+)
G941893 NA other upstream 3757674 10245109 ~ 10245506 (+)
LOC118937463 NA other upstream 5147743 8845565 ~ 8855476 (+)
G940376 NA other upstream 5350659 8651504 ~ 8652993 (+)
G946426 ramp3 other downstream 61071 14064548 ~ 14065869 (+)
G946644 NA other downstream 307098 14310575 ~ 14314318 (+)
G946643 NA other downstream 314531 14318008 ~ 14318623 (+)
G946642 LOC106590417 other downstream 315188 14318665 ~ 14329336 (+)

Expression


Co-expression Network