Gene
RNA
| Item | Value |
|---|---|
| gene id | G946464 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 14015893 ~ 14016198 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1079216 | True | 306 | lncRNA | 0.42 | 1 | 14015893 | 14016198 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937317 | LOC106590264 | coding | downstream | 5413 | 14001819 ~ 14010480 (-) |
| LOC118937437 | NA | coding | downstream | 86199 | 13927809 ~ 13929694 (-) |
| prkdc | prkdc | coding | downstream | 88432 | 13883898 ~ 13927461 (-) |
| LOC110535299 | LOC106579561 | coding | downstream | 155062 | 13855171 ~ 13860831 (-) |
| LOC110536603 | nme8 | coding | downstream | 191996 | 13818822 ~ 13823897 (-) |
| LOC110535302 | ramp3 | coding | upstream | 48305 | 14064503 ~ 14098978 (-) |
| LOC110535307 | rreb1 | coding | upstream | 210796 | 14226994 ~ 14297946 (-) |
| ly86 | NA | coding | upstream | 292397 | 14308595 ~ 14315733 (-) |
| LOC110535310 | LOC106579553 | coding | upstream | 345396 | 14361594 ~ 14372083 (-) |
| irf9 | irf9 | coding | upstream | 417314 | 14433512 ~ 14441499 (-) |
| G946352 | NA | non-coding | downstream | 24541 | 13991055 ~ 13991352 (-) |
| G946283 | NA | non-coding | downstream | 78903 | 13936778 ~ 13936990 (-) |
| G946248 | NA | non-coding | downstream | 176726 | 13838801 ~ 13839167 (-) |
| G946244 | NA | non-coding | downstream | 183287 | 13832394 ~ 13832606 (-) |
| G946243 | NA | non-coding | downstream | 189079 | 13826596 ~ 13826814 (-) |
| G946466 | NA | non-coding | upstream | 1449 | 14017647 ~ 14018270 (-) |
| G946477 | NA | non-coding | upstream | 18139 | 14034337 ~ 14034550 (-) |
| G946739 | NA | non-coding | upstream | 97927 | 14114125 ~ 14115319 (-) |
| G946740 | NA | non-coding | upstream | 100623 | 14116821 ~ 14118586 (-) |
| G946741 | NA | non-coding | upstream | 102471 | 14118669 ~ 14120063 (-) |
| G945345 | LOC105027308 | other | downstream | 1621755 | 12393397 ~ 12394138 (-) |
| LOC110536549 | LOC106579607 | other | downstream | 1657014 | 12348249 ~ 12366127 (-) |
| LOC110536548 | LOC106579654 | other | downstream | 2935376 | 11061866 ~ 11143146 (-) |
| G942483 | LOC106590343 | other | downstream | 3271216 | 10743314 ~ 10744677 (-) |
| G942454 | NA | other | downstream | 3373250 | 10639629 ~ 10642643 (-) |
| mtfr1 | LOC106579534 | other | upstream | 868137 | 14884317 ~ 14897579 (-) |
| G947750 | NA | other | upstream | 1190233 | 15206431 ~ 15209597 (-) |
| G947894 | LOC106579543 | other | upstream | 1349752 | 15365950 ~ 15366301 (-) |
| pan3 | pan3 | other | upstream | 1435129 | 15439415 ~ 15455911 (-) |
