Gene
RNA
| Item | Value |
|---|---|
| gene id | G946739 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 14114125 ~ 14115319 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC107373360 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1079503 | True | 1195 | lncRNA | 0.43 | 1 | 14114125 | 14115319 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535302 | ramp3 | coding | downstream | 15147 | 14064503 ~ 14098978 (-) |
| LOC118937317 | LOC106590264 | coding | downstream | 103645 | 14001819 ~ 14010480 (-) |
| LOC118937437 | NA | coding | downstream | 184431 | 13927809 ~ 13929694 (-) |
| prkdc | prkdc | coding | downstream | 186664 | 13883898 ~ 13927461 (-) |
| LOC110535299 | LOC106579561 | coding | downstream | 253294 | 13855171 ~ 13860831 (-) |
| LOC110535307 | rreb1 | coding | upstream | 111675 | 14226994 ~ 14297946 (-) |
| ly86 | NA | coding | upstream | 193276 | 14308595 ~ 14315733 (-) |
| LOC110535310 | LOC106579553 | coding | upstream | 246275 | 14361594 ~ 14372083 (-) |
| irf9 | irf9 | coding | upstream | 318193 | 14433512 ~ 14441499 (-) |
| LOC110536554 | LOC106579548 | coding | upstream | 326315 | 14441634 ~ 14456679 (-) |
| G946477 | NA | non-coding | downstream | 79575 | 14034337 ~ 14034550 (-) |
| G946466 | NA | non-coding | downstream | 95855 | 14017647 ~ 14018270 (-) |
| G946464 | NA | non-coding | downstream | 97927 | 14015893 ~ 14016198 (-) |
| G946352 | NA | non-coding | downstream | 122773 | 13991055 ~ 13991352 (-) |
| G946283 | NA | non-coding | downstream | 177135 | 13936778 ~ 13936990 (-) |
| G946740 | NA | non-coding | upstream | 1502 | 14116821 ~ 14118586 (-) |
| G946741 | NA | non-coding | upstream | 3350 | 14118669 ~ 14120063 (-) |
| G946759 | NA | non-coding | upstream | 39602 | 14154921 ~ 14156022 (-) |
| G946757 | NA | non-coding | upstream | 90170 | 14205489 ~ 14207539 (-) |
| G946755 | NA | non-coding | upstream | 103825 | 14219144 ~ 14220480 (-) |
| G945345 | LOC105027308 | other | downstream | 1719987 | 12393397 ~ 12394138 (-) |
| LOC110536549 | LOC106579607 | other | downstream | 1755246 | 12348249 ~ 12366127 (-) |
| LOC110536548 | LOC106579654 | other | downstream | 3033608 | 11061866 ~ 11143146 (-) |
| G942483 | LOC106590343 | other | downstream | 3369448 | 10743314 ~ 10744677 (-) |
| G942454 | NA | other | downstream | 3471482 | 10639629 ~ 10642643 (-) |
| mtfr1 | LOC106579534 | other | upstream | 769016 | 14884317 ~ 14897579 (-) |
| G947750 | NA | other | upstream | 1091112 | 15206431 ~ 15209597 (-) |
| G947894 | LOC106579543 | other | upstream | 1250631 | 15365950 ~ 15366301 (-) |
| pan3 | pan3 | other | upstream | 1336008 | 15439415 ~ 15455911 (-) |
