G946616


Basic Information

Item Value
gene id G946616
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 14239836 ~ 14240314 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1079371
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggctccagTACCTGAGCGTGGTGTCGGGGTGTGTGTCCATGTGGACTTCCAGGTCGTACTTGCAGCCAAAGGTCTTGAAGCAGATCGGGCACGGCAACACCTCATCATCCCCCTGGCCTgaacccacctcctccaacacACTCTCCTCTagcacctTTTTTTTTGGCCGGTTCGTCGCTTCGCTCCTTGTCCTCGTCCATGGCTGACCTCCTCTTGGCGGAGGGGCGGCGTCTCTTGGTGGGCAAGGGGGGGCTGGTGGGAACGACGCCAGCCGGGTCTTTGTCATGGATCTTCA

Function

NR:

description
ras-responsive element-binding protein 1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1079371 True 350 lncRNA 0.59 2 14239836 14240314

Neighbor

gene id symbol gene type direction distance location
ssr1 ssr1 coding upstream 19336 14212415 ~ 14220500 (+)
LOC118937467 NA coding upstream 29490 14209150 ~ 14210346 (+)
LOC110535303 nebl coding upstream 32281 14121400 ~ 14207555 (+)
LOC110535304 NA coding upstream 36879 14154784 ~ 14202999 (+)
LOC110535301 LOC106579559 coding upstream 356601 13876801 ~ 13883235 (+)
LOC118936448 NA coding downstream 78428 14318742 ~ 14321570 (+)
LOC110536553 LOC106567469 coding downstream 81478 14321792 ~ 14329490 (+)
oplah oplah coding downstream 99823 14340137 ~ 14361493 (+)
LOC110535311 LOC106579551 coding downstream 132319 14372633 ~ 14394906 (+)
si:ch211-217a12.1 LOC106579549 coding downstream 165696 14406010 ~ 14421353 (+)
G946549 NA non-coding upstream 125269 14114083 ~ 14114567 (+)
G946545 NA non-coding upstream 127323 14112293 ~ 14112513 (+)
G946390 NA non-coding upstream 220076 14019324 ~ 14019760 (+)
G946377 NA non-coding upstream 232519 14006606 ~ 14007317 (+)
G946374 NA non-coding upstream 236359 14003180 ~ 14003477 (+)
G946635 NA non-coding downstream 36725 14277039 ~ 14278140 (+)
G946663 NA non-coding downstream 60656 14300970 ~ 14301208 (+)
G946664 NA non-coding downstream 61353 14301667 ~ 14301920 (+)
G946646 NA non-coding downstream 67387 14307701 ~ 14309785 (+)
G946649 NA non-coding downstream 94021 14334335 ~ 14336622 (+)
G946426 ramp3 other upstream 173967 14064548 ~ 14065869 (+)
G944957 NA other upstream 844961 13387550 ~ 13394875 (+)
G942702 NA other upstream 3128500 11110726 ~ 11111336 (+)
G941893 NA other upstream 3994330 10245109 ~ 10245506 (+)
G946644 NA other downstream 70261 14310575 ~ 14314318 (+)
G946643 NA other downstream 77694 14318008 ~ 14318623 (+)
G946642 LOC106590417 other downstream 78351 14318665 ~ 14329336 (+)
G946690 NA other downstream 159548 14399862 ~ 14400273 (+)
G946692 NA other downstream 160940 14401254 ~ 14401644 (+)

Expression


Co-expression Network