Gene
RNA
| Item | Value |
|---|---|
| gene id | G946819 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 14259961 ~ 14260330 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1079585 | True | 302 | lncRNA | 0.53 | 2 | 14259961 | 14260330 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535302 | ramp3 | coding | downstream | 160983 | 14064503 ~ 14098978 (-) |
| LOC118937317 | LOC106590264 | coding | downstream | 249481 | 14001819 ~ 14010480 (-) |
| LOC118937437 | NA | coding | downstream | 330267 | 13927809 ~ 13929694 (-) |
| prkdc | prkdc | coding | downstream | 332500 | 13883898 ~ 13927461 (-) |
| LOC110535299 | LOC106579561 | coding | downstream | 399130 | 13855171 ~ 13860831 (-) |
| ly86 | NA | coding | upstream | 48265 | 14308595 ~ 14315733 (-) |
| LOC110535310 | LOC106579553 | coding | upstream | 101264 | 14361594 ~ 14372083 (-) |
| irf9 | irf9 | coding | upstream | 173182 | 14433512 ~ 14441499 (-) |
| LOC110536554 | LOC106579548 | coding | upstream | 181304 | 14441634 ~ 14456679 (-) |
| LOC110535319 | LOC106579521 | coding | upstream | 352366 | 14612696 ~ 14638003 (-) |
| G946818 | NA | non-coding | downstream | 184 | 14259521 ~ 14259777 (-) |
| G946755 | NA | non-coding | downstream | 39481 | 14219144 ~ 14220480 (-) |
| G946757 | NA | non-coding | downstream | 52422 | 14205489 ~ 14207539 (-) |
| G946759 | NA | non-coding | downstream | 103939 | 14154921 ~ 14156022 (-) |
| G946741 | NA | non-coding | downstream | 139898 | 14118669 ~ 14120063 (-) |
| G946842 | NA | non-coding | upstream | 55497 | 14315827 ~ 14316036 (-) |
| G946843 | NA | non-coding | upstream | 56556 | 14316886 ~ 14317273 (-) |
| G946853 | NA | non-coding | upstream | 57682 | 14318012 ~ 14318630 (-) |
| G946845 | NA | non-coding | upstream | 67565 | 14327895 ~ 14332690 (-) |
| G945345 | LOC105027308 | other | downstream | 1865823 | 12393397 ~ 12394138 (-) |
| LOC110536549 | LOC106579607 | other | downstream | 1901082 | 12348249 ~ 12366127 (-) |
| LOC110536548 | LOC106579654 | other | downstream | 3179444 | 11061866 ~ 11143146 (-) |
| G942483 | LOC106590343 | other | downstream | 3515284 | 10743314 ~ 10744677 (-) |
| G942454 | NA | other | downstream | 3617318 | 10639629 ~ 10642643 (-) |
| mtfr1 | LOC106579534 | other | upstream | 624005 | 14884317 ~ 14897579 (-) |
| G947750 | NA | other | upstream | 946101 | 15206431 ~ 15209597 (-) |
| G947894 | LOC106579543 | other | upstream | 1105620 | 15365950 ~ 15366301 (-) |
| pan3 | pan3 | other | upstream | 1190997 | 15439415 ~ 15455911 (-) |
