G946643


Basic Information

Item Value
gene id G946643
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 14318008 ~ 14318623 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1079403
caATTGAGGGACTACGATGAAACTgatatttttatttaaataataacAACAATCGCTGCTGGCAATACTGGGGTGGTGGTAAACACACCGGGAACAGTCTCCAAACTCTTGACGTCTCCAAACACTGCATGAGGCTTTAGGTGGAATACCGCTGAACTCAGACGGGTGGACTACTCACACCCCTCCGCCGGACCTGTCCTCATCTATCCCCAGCTATGGAACCTCGCAAACTGGCTGCCATACAGTATTGATGTCGGTACGGGTGTCAGTTTCCCATTCTGGTATTCGGTCGCTGTGTCTTCCAGAGGCAGGTGATGAGTCAGTCCGTCTCCAGCTCTGTATGGACCCCGGGAAGACCGAGGAATTCCGTCTCATGCTACGGGACACTAGCGGAACAACGGATCGGAGTGTGATAAGACAGCACGATGTTTTCATTATTaccaagcaggcaggcaggcatggaTGTACAGAAGGTTTTGCCATTACACTATTACATTACCCATGGGCTCATTTAGCTcattttgcaccacagtatctctacttgcacatccatcttttgcacatctaccattccagtgtttaattgccatattgtaattacttcaccaccatggcc

Function

NR:

description
PREDICTED: ranBP-type and C3HC4-type zinc finger-containing protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1079403 True 616 TUCP 0.48 1 14318008 14318623

Neighbor

gene id symbol gene type direction distance location
ssr1 ssr1 coding upstream 97508 14212415 ~ 14220500 (+)
LOC118937467 NA coding upstream 107662 14209150 ~ 14210346 (+)
LOC110535303 nebl coding upstream 110453 14121400 ~ 14207555 (+)
LOC110535304 NA coding upstream 115051 14154784 ~ 14202999 (+)
LOC110535301 LOC106579559 coding upstream 434773 13876801 ~ 13883235 (+)
LOC118936448 NA coding downstream 119 14318742 ~ 14321570 (+)
LOC110536553 LOC106567469 coding downstream 3169 14321792 ~ 14329490 (+)
oplah oplah coding downstream 21514 14340137 ~ 14361493 (+)
LOC110535311 LOC106579551 coding downstream 54010 14372633 ~ 14394906 (+)
si:ch211-217a12.1 LOC106579549 coding downstream 87387 14406010 ~ 14421353 (+)
G946646 NA non-coding upstream 8223 14307701 ~ 14309785 (+)
G946664 NA non-coding upstream 16088 14301667 ~ 14301920 (+)
G946663 NA non-coding upstream 16800 14300970 ~ 14301208 (+)
G946635 NA non-coding upstream 39868 14277039 ~ 14278140 (+)
G946616 NA non-coding upstream 77694 14239836 ~ 14240314 (+)
G946649 NA non-coding downstream 15712 14334335 ~ 14336622 (+)
G946691 NA non-coding downstream 82181 14400804 ~ 14401022 (+)
G946694 NA non-coding downstream 84317 14402940 ~ 14403169 (+)
G946696 NA non-coding downstream 87785 14406408 ~ 14406709 (+)
G946678 NA non-coding downstream 124131 14442754 ~ 14444395 (+)
G946644 NA other upstream 3690 14310575 ~ 14314318 (+)
G946426 ramp3 other upstream 252139 14064548 ~ 14065869 (+)
G944957 NA other upstream 923133 13387550 ~ 13394875 (+)
G942702 NA other upstream 3206672 11110726 ~ 11111336 (+)
G946642 LOC106590417 other downstream 42 14318665 ~ 14329336 (+)
G946690 NA other downstream 81239 14399862 ~ 14400273 (+)
G946692 NA other downstream 82631 14401254 ~ 14401644 (+)
G946999 NA other downstream 263920 14582543 ~ 14584049 (+)
LOC110535322 LOC106579526 other downstream 347103 14665667 ~ 14715423 (+)

Expression


Co-expression Network