G946692


Basic Information

Item Value
gene id G946692
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 14401254 ~ 14401644 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1079455
aacaaaactaaggagatgattgtggacttcaggaaacagcagagggaacacccccctatccacatcgatggaacagtagtggagagggtagcaagttttaagttcctcggcatacacatcacagacaaactgaattggtccactcacacagacagcattgtgaagaaggcgcagcagcgcctcttcaacctcaggaggctgaagaaattcggcttgtcgccaaaagcactcacaaacttctacagatgcacaatcgagagcatcctggcgggctgtatcaccgcctggtacggcaactgctcctccctcaaccgtaaggctctccagagggtagtgaggtctgcacaacgcatcaccgggggcaaactacctgccctccaggacacctaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1079455 True 391 TUCP 0.52 1 14401254 14401644

Neighbor

gene id symbol gene type direction distance location
LOC110535311 LOC106579551 coding upstream 6348 14372633 ~ 14394906 (+)
oplah oplah coding upstream 39761 14340137 ~ 14361493 (+)
LOC110536553 LOC106567469 coding upstream 71764 14321792 ~ 14329490 (+)
LOC118936448 NA coding upstream 79684 14318742 ~ 14321570 (+)
ssr1 ssr1 coding upstream 180754 14212415 ~ 14220500 (+)
si:ch211-217a12.1 LOC106579549 coding downstream 4366 14406010 ~ 14421353 (+)
emc9 LOC106579550 coding downstream 23821 14425465 ~ 14433808 (+)
cpa6 cpa6 coding downstream 67346 14468990 ~ 14513210 (+)
LOC110535318 LOC106579520 coding downstream 114292 14515936 ~ 14612575 (+)
csn5 csn5 coding downstream 236615 14638259 ~ 14642624 (+)
G946691 NA non-coding upstream 232 14400804 ~ 14401022 (+)
G946649 NA non-coding upstream 64632 14334335 ~ 14336622 (+)
G946646 NA non-coding upstream 91469 14307701 ~ 14309785 (+)
G946664 NA non-coding upstream 99334 14301667 ~ 14301920 (+)
G946663 NA non-coding upstream 100046 14300970 ~ 14301208 (+)
G946694 NA non-coding downstream 1296 14402940 ~ 14403169 (+)
G946696 NA non-coding downstream 4764 14406408 ~ 14406709 (+)
G946678 NA non-coding downstream 41110 14442754 ~ 14444395 (+)
G946706 NA non-coding downstream 58362 14460006 ~ 14460219 (+)
G946712 NA non-coding downstream 65634 14467278 ~ 14467614 (+)
G946690 NA other upstream 981 14399862 ~ 14400273 (+)
G946642 LOC106590417 other upstream 71918 14318665 ~ 14329336 (+)
G946643 NA other upstream 82631 14318008 ~ 14318623 (+)
G946644 NA other upstream 86936 14310575 ~ 14314318 (+)
LOC110535304 NA other upstream 198255 14154784 ~ 14202999 (+)
G946999 NA other downstream 180899 14582543 ~ 14584049 (+)
LOC110535322 LOC106579526 other downstream 264082 14665667 ~ 14715423 (+)
G947301 LOC106590396 other downstream 484970 14886614 ~ 14887282 (+)
spata13 LOC106579541 other downstream 883535 15285042 ~ 15320246 (+)
LOC110535338 LOC106579503 other downstream 1036037 15375660 ~ 15478222 (+)

Expression


Co-expression Network