G946706


Basic Information

Item Value
gene id G946706
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 14460006 ~ 14460219 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1079470
aatagttgattctaagatttgtatttgatcatatatatgtttttgctgtttgttctttgttatagagccaaaaatattggataagtggtttacccatacatctccattttggatagataattctttgtgttgttgtttgtttagtgttttccaattttcccagaagtggttagagtctatggattcttcaattacattgagctgatttctgacg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1079470 True 214 lncRNA 0.31 1 14460006 14460219

Neighbor

gene id symbol gene type direction distance location
emc9 LOC106579550 coding upstream 26198 14425465 ~ 14433808 (+)
si:ch211-217a12.1 LOC106579549 coding upstream 38653 14406010 ~ 14421353 (+)
LOC110535311 LOC106579551 coding upstream 65100 14372633 ~ 14394906 (+)
oplah oplah coding upstream 98513 14340137 ~ 14361493 (+)
LOC110536553 LOC106567469 coding upstream 130516 14321792 ~ 14329490 (+)
cpa6 cpa6 coding downstream 8771 14468990 ~ 14513210 (+)
LOC110535318 LOC106579520 coding downstream 55717 14515936 ~ 14612575 (+)
csn5 csn5 coding downstream 178040 14638259 ~ 14642624 (+)
ppp1r42 ppp1r42 coding downstream 185423 14645642 ~ 14659439 (+)
LOC110535321 LOC106579524 coding downstream 200066 14660285 ~ 14663560 (+)
G946678 NA non-coding upstream 15611 14442754 ~ 14444395 (+)
G946696 NA non-coding upstream 53297 14406408 ~ 14406709 (+)
G946694 NA non-coding upstream 56837 14402940 ~ 14403169 (+)
G946691 NA non-coding upstream 58984 14400804 ~ 14401022 (+)
G946649 NA non-coding upstream 123384 14334335 ~ 14336622 (+)
G946712 NA non-coding downstream 7059 14467278 ~ 14467614 (+)
G946951 NA non-coding downstream 53402 14513621 ~ 14513827 (+)
G946957 NA non-coding downstream 106974 14567193 ~ 14595028 (+)
G946998 NA non-coding downstream 120335 14580554 ~ 14581573 (+)
G946692 NA other upstream 58362 14401254 ~ 14401644 (+)
G946690 NA other upstream 59733 14399862 ~ 14400273 (+)
G946642 LOC106590417 other upstream 130670 14318665 ~ 14329336 (+)
G946643 NA other upstream 141383 14318008 ~ 14318623 (+)
G946644 NA other upstream 145688 14310575 ~ 14314318 (+)
G946999 NA other downstream 122324 14582543 ~ 14584049 (+)
LOC110535322 LOC106579526 other downstream 205507 14665667 ~ 14715423 (+)
G947301 LOC106590396 other downstream 426395 14886614 ~ 14887282 (+)
spata13 LOC106579541 other downstream 824960 15285042 ~ 15320246 (+)
LOC110535338 LOC106579503 other downstream 977462 15375660 ~ 15478222 (+)

Expression


Co-expression Network