G946712


Basic Information

Item Value
gene id G946712
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 14467278 ~ 14467614 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1079476
cacccgaccttaacccaactgagatggtttgggatgacttggaccgcagagtgaaggaaaagcagccaacaagtgctcagaatatgtgggatctccttcaagactgttggaaaagcattccaggtgaaactggttgagagaatgccaagaccgtgcaaagctgtcatcaaggcaaagggtggctattttgaagaatctaaaatatattttgatttgtttgacactcttttggttactgcacgattccatatgtgttatttcatagtgttgatgtcgtaactattgttctacaatgtagaaaatagtaaaaatcaagagcaacccttgaatgaatagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1079476 True 337 lncRNA 0.40 1 14467278 14467614

Neighbor

gene id symbol gene type direction distance location
emc9 LOC106579550 coding upstream 33470 14425465 ~ 14433808 (+)
si:ch211-217a12.1 LOC106579549 coding upstream 45925 14406010 ~ 14421353 (+)
LOC110535311 LOC106579551 coding upstream 72372 14372633 ~ 14394906 (+)
oplah oplah coding upstream 105785 14340137 ~ 14361493 (+)
LOC110536553 LOC106567469 coding upstream 137788 14321792 ~ 14329490 (+)
cpa6 cpa6 coding downstream 1376 14468990 ~ 14513210 (+)
LOC110535318 LOC106579520 coding downstream 48322 14515936 ~ 14612575 (+)
csn5 csn5 coding downstream 170645 14638259 ~ 14642624 (+)
ppp1r42 ppp1r42 coding downstream 178028 14645642 ~ 14659439 (+)
LOC110535321 LOC106579524 coding downstream 192671 14660285 ~ 14663560 (+)
G946706 NA non-coding upstream 7059 14460006 ~ 14460219 (+)
G946678 NA non-coding upstream 22883 14442754 ~ 14444395 (+)
G946696 NA non-coding upstream 60569 14406408 ~ 14406709 (+)
G946694 NA non-coding upstream 64109 14402940 ~ 14403169 (+)
G946691 NA non-coding upstream 66256 14400804 ~ 14401022 (+)
G946951 NA non-coding downstream 46007 14513621 ~ 14513827 (+)
G946957 NA non-coding downstream 99579 14567193 ~ 14595028 (+)
G946998 NA non-coding downstream 112940 14580554 ~ 14581573 (+)
G946955 LOC106579521 non-coding downstream 145854 14613468 ~ 14615178 (+)
G946692 NA other upstream 65634 14401254 ~ 14401644 (+)
G946690 NA other upstream 67005 14399862 ~ 14400273 (+)
G946642 LOC106590417 other upstream 137942 14318665 ~ 14329336 (+)
G946643 NA other upstream 148655 14318008 ~ 14318623 (+)
G946644 NA other upstream 152960 14310575 ~ 14314318 (+)
G946999 NA other downstream 114929 14582543 ~ 14584049 (+)
LOC110535322 LOC106579526 other downstream 198112 14665667 ~ 14715423 (+)
G947301 LOC106590396 other downstream 419000 14886614 ~ 14887282 (+)
spata13 LOC106579541 other downstream 817565 15285042 ~ 15320246 (+)
LOC110535338 LOC106579503 other downstream 970067 15375660 ~ 15478222 (+)

Expression


Co-expression Network