Gene
RNA
| Item | Value |
|---|---|
| gene id | G947048 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 14696113 ~ 14696330 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1079885 | True | 218 | lncRNA | 0.41 | 1 | 14696113 | 14696330 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535321 | LOC106579524 | coding | upstream | 32553 | 14660285 ~ 14663560 (+) |
| ppp1r42 | ppp1r42 | coding | upstream | 36674 | 14645642 ~ 14659439 (+) |
| csn5 | csn5 | coding | upstream | 53489 | 14638259 ~ 14642624 (+) |
| LOC110535318 | LOC106579520 | coding | upstream | 83538 | 14515936 ~ 14612575 (+) |
| cpa6 | cpa6 | coding | upstream | 182903 | 14468990 ~ 14513210 (+) |
| crf | crf | coding | downstream | 96865 | 14793195 ~ 14794694 (+) |
| trnay-gua-3 | NA | coding | downstream | 134446 | 14830776 ~ 14830861 (+) |
| LOC110535327 | LOC106579529 | coding | downstream | 144323 | 14840653 ~ 14882192 (+) |
| LOC110535331 | LOC106579535 | coding | downstream | 209098 | 14905428 ~ 14918163 (+) |
| LOC118937318 | NA | coding | downstream | 301549 | 14997879 ~ 15016727 (+) |
| G946955 | LOC106579521 | non-coding | upstream | 80935 | 14613468 ~ 14615178 (+) |
| G946957 | NA | non-coding | upstream | 101085 | 14567193 ~ 14595028 (+) |
| G946998 | NA | non-coding | upstream | 114540 | 14580554 ~ 14581573 (+) |
| G946951 | NA | non-coding | upstream | 182286 | 14513621 ~ 14513827 (+) |
| G947057 | NA | non-coding | downstream | 22118 | 14718448 ~ 14718683 (+) |
| G947059 | NA | non-coding | downstream | 25636 | 14721966 ~ 14722170 (+) |
| G947207 | NA | non-coding | downstream | 46021 | 14742351 ~ 14742560 (+) |
| G947252 | NA | non-coding | downstream | 77039 | 14773369 ~ 14773842 (+) |
| G947254 | NA | non-coding | downstream | 77673 | 14774003 ~ 14777036 (+) |
| LOC110535322 | LOC106579526 | other | upstream | 26357 | 14665667 ~ 14715423 (+) |
| G946999 | NA | other | upstream | 112064 | 14582543 ~ 14584049 (+) |
| G946692 | NA | other | upstream | 294469 | 14401254 ~ 14401644 (+) |
| G946690 | NA | other | upstream | 295840 | 14399862 ~ 14400273 (+) |
| G946642 | LOC106590417 | other | upstream | 366777 | 14318665 ~ 14329336 (+) |
| G947301 | LOC106590396 | other | downstream | 190284 | 14886614 ~ 14887282 (+) |
| spata13 | LOC106579541 | other | downstream | 588849 | 15285042 ~ 15320246 (+) |
| LOC110535338 | LOC106579503 | other | downstream | 741351 | 15375660 ~ 15478222 (+) |
| rnf6 | LOC106579512 | other | downstream | 891500 | 15587284 ~ 15593900 (+) |
| atp8a2 | LOC106579514 | other | downstream | 955644 | 15594416 ~ 15660363 (+) |
