Gene
RNA
| Item | Value |
|---|---|
| gene id | G947407 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 14905568 ~ 14906913 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| armadillo repeat-containing protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1080280 | True | 455 | lncRNA | 0.46 | 2 | 14905568 | 14906913 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mtfr1 | LOC106579534 | coding | downstream | 7989 | 14884317 ~ 14897579 (-) |
| LOC110535328 | dnjc5 | coding | downstream | 64909 | 14830974 ~ 14840659 (-) |
| LOC110535326 | NA | coding | downstream | 79969 | 14815506 ~ 14825629 (-) |
| LOC110536555 | NA | coding | downstream | 94593 | 14797797 ~ 14810975 (-) |
| LOC110535325 | LOC106579528 | coding | downstream | 172538 | 14731383 ~ 14733030 (-) |
| LOC110535332 | LOC106579536 | coding | upstream | 173611 | 15080524 ~ 15082767 (-) |
| LOC118937468 | NA | coding | upstream | 312093 | 15219006 ~ 15221030 (-) |
| LOC110535333 | LOC106590438 | coding | upstream | 344358 | 15251271 ~ 15268657 (-) |
| pan3 | pan3 | coding | upstream | 532502 | 15439415 ~ 15455911 (-) |
| pdx1 | pdx1 | coding | upstream | 573585 | 15480498 ~ 15485495 (-) |
| G947397 | NA | non-coding | downstream | 17263 | 14887845 ~ 14888305 (-) |
| G947347 | NA | non-coding | downstream | 96824 | 14808409 ~ 14808744 (-) |
| G947344 | NA | non-coding | downstream | 99770 | 14805512 ~ 14805798 (-) |
| G947439 | NA | non-coding | upstream | 28959 | 14935872 ~ 14936076 (-) |
| G947511 | NA | non-coding | upstream | 81903 | 14988816 ~ 14989049 (-) |
| G947547 | NA | non-coding | upstream | 114624 | 15021537 ~ 15021801 (-) |
| G947549 | NA | non-coding | upstream | 115160 | 15022073 ~ 15022498 (-) |
| G947672 | NA | non-coding | upstream | 168474 | 15075387 ~ 15075661 (-) |
| ly86 | NA | other | downstream | 589882 | 14308595 ~ 14315733 (-) |
| G945345 | LOC105027308 | other | downstream | 2511430 | 12393397 ~ 12394138 (-) |
| LOC110536549 | LOC106579607 | other | downstream | 2546689 | 12348249 ~ 12366127 (-) |
| LOC110536548 | LOC106579654 | other | downstream | 3825051 | 11061866 ~ 11143146 (-) |
| G947750 | NA | other | upstream | 299518 | 15206431 ~ 15209597 (-) |
| G947894 | LOC106579543 | other | upstream | 459037 | 15365950 ~ 15366301 (-) |
| LOC110535357 | LOC106579444 | other | upstream | 893862 | 15800721 ~ 15810494 (-) |
