G947438


Basic Information

Item Value
gene id G947438
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 14935657 ~ 14935868 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1080312
gtgggtgctgctatggtgaccagtgagctgagataaggcgtgtctttacctagcaaagacttatagatgacctggagccagtgggtttggcgacgaatatgaagcgagggacaGCCAACGAGAACattcaggtcgcagtggtgggtagtatatgcggctttggtgacaaaacggatggcactgtgatagactgcgtccaatttgctgagtag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1080312 True 212 lncRNA 0.51 1 14935657 14935868

Neighbor

gene id symbol gene type direction distance location
LOC110535331 LOC106579535 coding upstream 17494 14905428 ~ 14918163 (+)
LOC110535327 LOC106579529 coding upstream 53465 14840653 ~ 14882192 (+)
trnay-gua-3 NA coding upstream 104796 14830776 ~ 14830861 (+)
crf crf coding upstream 140963 14793195 ~ 14794694 (+)
LOC110535322 LOC106579526 coding upstream 220234 14665667 ~ 14715423 (+)
LOC118937318 NA coding downstream 62011 14997879 ~ 15016727 (+)
abhd10b abhd10 coding downstream 333744 15269612 ~ 15277101 (+)
tagln3b tagln3 coding downstream 342606 15278474 ~ 15282213 (+)
LOC110536556 LOC106590436 coding downstream 347427 15283295 ~ 15284424 (+)
spata13 LOC106579541 coding downstream 349174 15285042 ~ 15320246 (+)
G947426 NA non-coding upstream 7918 14927503 ~ 14927739 (+)
G947277 NA non-coding upstream 16262 14919154 ~ 14919395 (+)
G947338 NA non-coding upstream 34788 14900653 ~ 14900869 (+)
G947302 NA non-coding upstream 45192 14889628 ~ 14890465 (+)
G947286 NA non-coding upstream 123114 14812331 ~ 14812543 (+)
G947440 NA non-coding downstream 810 14936678 ~ 14936904 (+)
G947443 NA non-coding downstream 4550 14940418 ~ 14940622 (+)
G947449 NA non-coding downstream 8166 14944034 ~ 14944251 (+)
G947460 NA non-coding downstream 21275 14957143 ~ 14957372 (+)
G947474 NA non-coding downstream 29407 14965275 ~ 14965488 (+)
G947301 LOC106590396 other upstream 48375 14886614 ~ 14887282 (+)
G946999 NA other upstream 351608 14582543 ~ 14584049 (+)
G946692 NA other upstream 534013 14401254 ~ 14401644 (+)
G946690 NA other upstream 535384 14399862 ~ 14400273 (+)
LOC110535338 LOC106579503 other downstream 501813 15375660 ~ 15478222 (+)
rnf6 LOC106579512 other downstream 651962 15587284 ~ 15593900 (+)
atp8a2 LOC106579514 other downstream 716106 15594416 ~ 15660363 (+)
boc LOC106579445 other downstream 811505 15747150 ~ 15800515 (+)

Expression


Co-expression Network