Gene
RNA
| Item | Value |
|---|---|
| gene id | G947672 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 15075387 ~ 15075661 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1080563 | True | 275 | lncRNA | 0.49 | 1 | 15075387 | 15075661 |
15,073,200
15,073,600
15,074,000
15,074,400
15,074,800
15,075,200
15,075,600
15,076,000
15,076,400
15,076,800
15,077,200
15,077,600
NC_048575.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mtfr1 | LOC106579534 | coding | downstream | 177808 | 14884317 ~ 14897579 (-) |
| LOC110535328 | dnjc5 | coding | downstream | 234728 | 14830974 ~ 14840659 (-) |
| LOC110535326 | NA | coding | downstream | 249788 | 14815506 ~ 14825629 (-) |
| LOC110536555 | NA | coding | downstream | 264412 | 14797797 ~ 14810975 (-) |
| LOC110535325 | LOC106579528 | coding | downstream | 342357 | 14731383 ~ 14733030 (-) |
| LOC110535332 | LOC106579536 | coding | upstream | 4863 | 15080524 ~ 15082767 (-) |
| LOC118937468 | NA | coding | upstream | 143345 | 15219006 ~ 15221030 (-) |
| LOC110535333 | LOC106590438 | coding | upstream | 175610 | 15251271 ~ 15268657 (-) |
| pan3 | pan3 | coding | upstream | 363754 | 15439415 ~ 15455911 (-) |
| pdx1 | pdx1 | coding | upstream | 404837 | 15480498 ~ 15485495 (-) |
| G947549 | NA | non-coding | downstream | 52889 | 15022073 ~ 15022498 (-) |
| G947547 | NA | non-coding | downstream | 53586 | 15021537 ~ 15021801 (-) |
| G947511 | NA | non-coding | downstream | 86338 | 14988816 ~ 14989049 (-) |
| G947439 | NA | non-coding | downstream | 139311 | 14935872 ~ 14936076 (-) |
| G947407 | NA | non-coding | downstream | 168474 | 14905568 ~ 14906913 (-) |
| G947683 | NA | non-coding | upstream | 13449 | 15089110 ~ 15089330 (-) |
| G947666 | NA | non-coding | upstream | 18832 | 15094493 ~ 15095231 (-) |
| G947664 | NA | non-coding | upstream | 20516 | 15096177 ~ 15158908 (-) |
| G947726 | NA | non-coding | upstream | 101102 | 15176763 ~ 15177067 (-) |
| G947727 | NA | non-coding | upstream | 102329 | 15177990 ~ 15178240 (-) |
| ly86 | NA | other | downstream | 759701 | 14308595 ~ 14315733 (-) |
| G945345 | LOC105027308 | other | downstream | 2681249 | 12393397 ~ 12394138 (-) |
| LOC110536549 | LOC106579607 | other | downstream | 2716508 | 12348249 ~ 12366127 (-) |
| LOC110536548 | LOC106579654 | other | downstream | 3994870 | 11061866 ~ 11143146 (-) |
| G947750 | NA | other | upstream | 130770 | 15206431 ~ 15209597 (-) |
| G947894 | LOC106579543 | other | upstream | 290289 | 15365950 ~ 15366301 (-) |
| LOC110535357 | LOC106579444 | other | upstream | 725114 | 15800721 ~ 15810494 (-) |
