Gene
RNA
| Item | Value |
|---|---|
| gene id | G947745 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 15203558 ~ 15204228 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1080638 | False | 383 | lncRNA | 0.51 | 2 | 15203558 | 15204096 |
| TU1080639 | True | 419 | lncRNA | 0.48 | 2 | 15203558 | 15204228 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937318 | NA | coding | upstream | 186831 | 14997879 ~ 15016727 (+) |
| LOC110535331 | LOC106579535 | coding | upstream | 285395 | 14905428 ~ 14918163 (+) |
| LOC110535327 | LOC106579529 | coding | upstream | 321366 | 14840653 ~ 14882192 (+) |
| trnay-gua-3 | NA | coding | upstream | 372697 | 14830776 ~ 14830861 (+) |
| crf | crf | coding | upstream | 408864 | 14793195 ~ 14794694 (+) |
| abhd10b | abhd10 | coding | downstream | 65384 | 15269612 ~ 15277101 (+) |
| tagln3b | tagln3 | coding | downstream | 74246 | 15278474 ~ 15282213 (+) |
| LOC110536556 | LOC106590436 | coding | downstream | 79067 | 15283295 ~ 15284424 (+) |
| spata13 | LOC106579541 | coding | downstream | 80814 | 15285042 ~ 15320246 (+) |
| tmprss7 | tmprss7 | coding | downstream | 116354 | 15320582 ~ 15337190 (+) |
| G947742 | NA | non-coding | upstream | 3199 | 15200022 ~ 15200359 (+) |
| G947661 | NA | non-coding | upstream | 14932 | 15188404 ~ 15188626 (+) |
| G947654 | NA | non-coding | upstream | 26803 | 15176463 ~ 15176755 (+) |
| G947648 | NA | non-coding | upstream | 31293 | 15161734 ~ 15172265 (+) |
| G947599 | NA | non-coding | upstream | 114154 | 15089092 ~ 15089404 (+) |
| G947748 | NA | non-coding | downstream | 1401 | 15205629 ~ 15205952 (+) |
| G947760 | NA | non-coding | downstream | 27782 | 15232010 ~ 15232325 (+) |
| G947761 | NA | non-coding | downstream | 28508 | 15232736 ~ 15232938 (+) |
| G947762 | NA | non-coding | downstream | 30055 | 15234283 ~ 15234760 (+) |
| G947765 | NA | non-coding | downstream | 36994 | 15241222 ~ 15241442 (+) |
| G947301 | LOC106590396 | other | upstream | 316276 | 14886614 ~ 14887282 (+) |
| LOC110535322 | LOC106579526 | other | upstream | 533802 | 14665667 ~ 14715423 (+) |
| G946999 | NA | other | upstream | 619509 | 14582543 ~ 14584049 (+) |
| G946692 | NA | other | upstream | 801914 | 14401254 ~ 14401644 (+) |
| G946690 | NA | other | upstream | 803285 | 14399862 ~ 14400273 (+) |
| LOC110535338 | LOC106579503 | other | downstream | 233453 | 15375660 ~ 15478222 (+) |
| rnf6 | LOC106579512 | other | downstream | 383602 | 15587284 ~ 15593900 (+) |
| atp8a2 | LOC106579514 | other | downstream | 447746 | 15594416 ~ 15660363 (+) |
| boc | LOC106579445 | other | downstream | 543145 | 15747150 ~ 15800515 (+) |
