Gene
RNA
| Item | Value |
|---|---|
| gene id | G947825 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 15232722 ~ 15232974 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1080741 | True | 253 | lncRNA | 0.47 | 1 | 15232722 | 15232974 |
15,229,600
15,230,000
15,230,400
15,230,800
15,231,200
15,231,600
15,232,000
15,232,400
15,232,800
15,233,200
15,233,600
15,234,000
NC_048575.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937468 | NA | coding | downstream | 11692 | 15219006 ~ 15221030 (-) |
| LOC110535332 | LOC106579536 | coding | downstream | 149955 | 15080524 ~ 15082767 (-) |
| mtfr1 | LOC106579534 | coding | downstream | 335143 | 14884317 ~ 14897579 (-) |
| LOC110535328 | dnjc5 | coding | downstream | 392063 | 14830974 ~ 14840659 (-) |
| LOC110535326 | NA | coding | downstream | 407123 | 14815506 ~ 14825629 (-) |
| LOC110535333 | LOC106590438 | coding | upstream | 18297 | 15251271 ~ 15268657 (-) |
| pan3 | pan3 | coding | upstream | 206441 | 15439415 ~ 15455911 (-) |
| pdx1 | pdx1 | coding | upstream | 247524 | 15480498 ~ 15485495 (-) |
| si:ch211-140b10.6 | polr1d | coding | upstream | 258863 | 15491837 ~ 15497193 (-) |
| rpl21 | rpl21 | coding | upstream | 293463 | 15526437 ~ 15530037 (-) |
| G947754 | NA | non-coding | downstream | 14323 | 15218139 ~ 15218399 (-) |
| G947752 | NA | non-coding | downstream | 18596 | 15213857 ~ 15214126 (-) |
| G947746 | NA | non-coding | downstream | 28589 | 15203553 ~ 15204133 (-) |
| G947735 | NA | non-coding | downstream | 38801 | 15193413 ~ 15193921 (-) |
| G947727 | NA | non-coding | downstream | 54482 | 15177990 ~ 15178240 (-) |
| G947827 | NA | non-coding | upstream | 1479 | 15234453 ~ 15234675 (-) |
| G947829 | NA | non-coding | upstream | 4601 | 15237575 ~ 15237905 (-) |
| G947832 | NA | non-coding | upstream | 8977 | 15241951 ~ 15242283 (-) |
| G947834 | NA | non-coding | upstream | 12525 | 15245499 ~ 15245709 (-) |
| G947837 | NA | non-coding | upstream | 15026 | 15248000 ~ 15248240 (-) |
| G947750 | NA | other | downstream | 23125 | 15206431 ~ 15209597 (-) |
| ly86 | NA | other | downstream | 917036 | 14308595 ~ 14315733 (-) |
| G945345 | LOC105027308 | other | downstream | 2838584 | 12393397 ~ 12394138 (-) |
| LOC110536549 | LOC106579607 | other | downstream | 2873843 | 12348249 ~ 12366127 (-) |
| G947894 | LOC106579543 | other | upstream | 132976 | 15365950 ~ 15366301 (-) |
| LOC110535357 | LOC106579444 | other | upstream | 567801 | 15800721 ~ 15810494 (-) |
| LOC110536560 | LOC106579448 | other | upstream | 641355 | 15873634 ~ 15899014 (-) |
