XLOC_028614


Basic Information

Item Value
gene id XLOC_028614
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 13477229 ~ 13478821 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00058127
ACATGGATCCCCAACTCCATTGCCAGTGTCAGTGTAACAAAAGAGTCTGCCACAACATGGGTCCAGCAGATCAACTGTGTCAACTCTGGCAAGGAACAAACACCCTGGAGGACCATATCTAGCTGCCAGTTGAACCCGCTAGAGCTGCAAGAGTCAACGCCACCACCGTCAGAACCATTGATGCCGCCAGATTCCTTCTGAATTTCCAAAAGGGCAAGCACCAGATCGCTCTGAATTCCCCAAATGGCAGGTGCCAGATTCCTCTGAATTCCTCAAATTTTGGGCACCAGAACCCTCTGAATTTCTCATATAGTGGGCGCCAGATACTTCTGAATTCTTTGAATGGCAGGCAGGGTCAGAGCTGCCACTCGTGTCTCACAAAGGGCTACCAGAGCTGTGTGACCCTCCATTGCTACCTGCACTCAGACTAACACCTGAGCTCCACAAGTGGTCGCTGCCATCATCAGAGCTACAACTACAAAAACTGTTACTGCAGCTGCCTAACGGGTTGTTTGAACTGCCAATGACTCCTGATCctaagcctcctgacccactggggttgtcTGACGCACCAGCATTTGCTGATCCTAAGCCTCCTGACCCATTGGGTTTGTCTGAATCACAAGTACTTTTTGAACCAGaacctcctgacccactggggttatCTGACTCACCAGCGCCTGCTGAACCAGAGCCTCTAAATCTGTTGCAACTCTACGCTTCTGGTCTTCCGCAGCTCCATGTTCCAGGCTCTCTGCAGCCCCATGCTCTAGGCCCACTACATCTTCACACTCCAGGTCTtccgcagctccatgctccaggtcCTCCACAGCTCCATGGGTTAGGCCCTCTGCAGCTCCACGCACCAGGCACACCTACACTGCATGGTCCTGGCCATCTGTTCCTCCCCTTTAAGGAATAGTGCAAAATCAGATCTTTATTAAACATATTGTAATATAACATGCACTGTAGGTTAAGATATAGAGATAATCTTTGCTTATTTTGTTGGTTTGAGTCAAGGACATTAGGAACAACAGCCTTCTCTCTGGATGGCTAATGGCACTCTTTTATCACACCAGAGACAAATACAGCTCCTGGGGGCAGACAATTCAGATGGGTGATGTGAACATTTTCCAAGAGTTCTGGGACTAGGATGTCATCTTGTGGGACTCGTGACCATACCTATGGGCCATAACCCTACCACAGTCTATGAGTTACAGACATGAGTTCTTGGAGGTAGGATATCCTTTGGTGGGAATTAGCTTGCAAGCTTTGGAGAAATAATAAACTTACTAGTATGCAGGTGTGACATTCAGAGGAGGTGAAgggcaatgtttatttttatgtaacacTAATGCCGCTGATGAATGATAAGTAAAACTAGTTATCCACAAATATTGAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00058127 True 1402 lncRNA 0.48 2 13477229 13478821

Neighbor

gene id symbol gene type direction distance location
XLOC_028613 NA coding downstream 84059 13345672 ~ 13393170 (-)
XLOC_028612 grip1 coding downstream 221416 13035870 ~ 13255813 (-)
XLOC_028611 NA coding downstream 453061 13023507 ~ 13024168 (-)
XLOC_028610 si:dkey-6a5.3 coding downstream 479642 12993913 ~ 12997587 (-)
XLOC_028609 NA coding downstream 487531 12988978 ~ 12989698 (-)
XLOC_028615 NA coding upstream 10942 13489763 ~ 13490081 (-)
XLOC_028616 si:ch211-266a5.12 coding upstream 20443 13499264 ~ 13502549 (-)
XLOC_028617 ifng1 coding upstream 28763 13507584 ~ 13509946 (-)
XLOC_028618 ifng1r coding upstream 38625 13517446 ~ 13518381 (-)
XLOC_028619 il26 coding upstream 56233 13535054 ~ 13538714 (-)
XLOC_028605 BX119963.4 non-coding downstream 593902 12873982 ~ 12883327 (-)
XLOC_028600 NA non-coding downstream 732876 12741362 ~ 12744353 (-)
XLOC_028624 NA non-coding upstream 147161 13625982 ~ 13626833 (-)
XLOC_028626 NA non-coding upstream 401715 13880536 ~ 13889482 (-)
XLOC_028631 NA non-coding upstream 490340 13969161 ~ 13979713 (-)
XLOC_028632 NA non-coding upstream 627854 14106675 ~ 14162327 (-)

Expression


Co-expression Network