Gene
RNA
| Item | Value |
|---|---|
| gene id | G947834 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 15245499 ~ 15245709 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1080750 | True | 211 | lncRNA | 0.47 | 1 | 15245499 | 15245709 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937468 | NA | coding | downstream | 24469 | 15219006 ~ 15221030 (-) |
| LOC110535332 | LOC106579536 | coding | downstream | 162732 | 15080524 ~ 15082767 (-) |
| mtfr1 | LOC106579534 | coding | downstream | 347920 | 14884317 ~ 14897579 (-) |
| LOC110535328 | dnjc5 | coding | downstream | 404840 | 14830974 ~ 14840659 (-) |
| LOC110535326 | NA | coding | downstream | 419900 | 14815506 ~ 14825629 (-) |
| LOC110535333 | LOC106590438 | coding | upstream | 5562 | 15251271 ~ 15268657 (-) |
| pan3 | pan3 | coding | upstream | 193706 | 15439415 ~ 15455911 (-) |
| pdx1 | pdx1 | coding | upstream | 234789 | 15480498 ~ 15485495 (-) |
| si:ch211-140b10.6 | polr1d | coding | upstream | 246128 | 15491837 ~ 15497193 (-) |
| rpl21 | rpl21 | coding | upstream | 280728 | 15526437 ~ 15530037 (-) |
| G947832 | NA | non-coding | downstream | 3216 | 15241951 ~ 15242283 (-) |
| G947829 | NA | non-coding | downstream | 7594 | 15237575 ~ 15237905 (-) |
| G947827 | NA | non-coding | downstream | 10824 | 15234453 ~ 15234675 (-) |
| G947825 | NA | non-coding | downstream | 12525 | 15232722 ~ 15232974 (-) |
| G947754 | NA | non-coding | downstream | 27100 | 15218139 ~ 15218399 (-) |
| G947837 | NA | non-coding | upstream | 2291 | 15248000 ~ 15248240 (-) |
| G947838 | NA | non-coding | upstream | 3004 | 15248713 ~ 15248944 (-) |
| G947818 | NA | non-coding | upstream | 4176 | 15249885 ~ 15250633 (-) |
| G947847 | tagln3 | non-coding | upstream | 33817 | 15279526 ~ 15280261 (-) |
| G947879 | tmprss7 | non-coding | upstream | 89504 | 15335213 ~ 15335500 (-) |
| G947750 | NA | other | downstream | 35902 | 15206431 ~ 15209597 (-) |
| ly86 | NA | other | downstream | 929813 | 14308595 ~ 14315733 (-) |
| G945345 | LOC105027308 | other | downstream | 2851361 | 12393397 ~ 12394138 (-) |
| LOC110536549 | LOC106579607 | other | downstream | 2886620 | 12348249 ~ 12366127 (-) |
| G947894 | LOC106579543 | other | upstream | 120241 | 15365950 ~ 15366301 (-) |
| LOC110535357 | LOC106579444 | other | upstream | 555066 | 15800721 ~ 15810494 (-) |
| LOC110536560 | LOC106579448 | other | upstream | 628620 | 15873634 ~ 15899014 (-) |
