Gene
RNA
| Item | Value |
|---|---|
| gene id | G947772 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 15246427 ~ 15246875 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1080677 | True | 449 | lncRNA | 0.37 | 1 | 15246427 | 15246875 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937318 | NA | coding | upstream | 229700 | 14997879 ~ 15016727 (+) |
| LOC110535331 | LOC106579535 | coding | upstream | 328264 | 14905428 ~ 14918163 (+) |
| LOC110535327 | LOC106579529 | coding | upstream | 364235 | 14840653 ~ 14882192 (+) |
| trnay-gua-3 | NA | coding | upstream | 415566 | 14830776 ~ 14830861 (+) |
| crf | crf | coding | upstream | 451733 | 14793195 ~ 14794694 (+) |
| abhd10b | abhd10 | coding | downstream | 22737 | 15269612 ~ 15277101 (+) |
| tagln3b | tagln3 | coding | downstream | 31599 | 15278474 ~ 15282213 (+) |
| LOC110536556 | LOC106590436 | coding | downstream | 36420 | 15283295 ~ 15284424 (+) |
| spata13 | LOC106579541 | coding | downstream | 38167 | 15285042 ~ 15320246 (+) |
| tmprss7 | tmprss7 | coding | downstream | 73707 | 15320582 ~ 15337190 (+) |
| G947765 | NA | non-coding | upstream | 4985 | 15241222 ~ 15241442 (+) |
| G947762 | NA | non-coding | upstream | 11667 | 15234283 ~ 15234760 (+) |
| G947761 | NA | non-coding | upstream | 13489 | 15232736 ~ 15232938 (+) |
| G947760 | NA | non-coding | upstream | 14102 | 15232010 ~ 15232325 (+) |
| G947748 | NA | non-coding | upstream | 40475 | 15205629 ~ 15205952 (+) |
| G947810 | NA | non-coding | downstream | 90629 | 15337504 ~ 15337795 (+) |
| G947811 | NA | non-coding | downstream | 91049 | 15337924 ~ 15338191 (+) |
| G947813 | NA | non-coding | downstream | 92792 | 15339667 ~ 15339910 (+) |
| LOC110536557 | LOC106579543 | non-coding | downstream | 106818 | 15342361 ~ 15367543 (+) |
| G947893 | NA | non-coding | downstream | 118412 | 15365287 ~ 15365605 (+) |
| G947301 | LOC106590396 | other | upstream | 359145 | 14886614 ~ 14887282 (+) |
| LOC110535322 | LOC106579526 | other | upstream | 576671 | 14665667 ~ 14715423 (+) |
| G946999 | NA | other | upstream | 662378 | 14582543 ~ 14584049 (+) |
| G946692 | NA | other | upstream | 844783 | 14401254 ~ 14401644 (+) |
| G946690 | NA | other | upstream | 846154 | 14399862 ~ 14400273 (+) |
| LOC110535338 | LOC106579503 | other | downstream | 190806 | 15375660 ~ 15478222 (+) |
| rnf6 | LOC106579512 | other | downstream | 340955 | 15587284 ~ 15593900 (+) |
| atp8a2 | LOC106579514 | other | downstream | 405099 | 15594416 ~ 15660363 (+) |
| boc | LOC106579445 | other | downstream | 500498 | 15747150 ~ 15800515 (+) |
