Gene
RNA
| Item | Value |
|---|---|
| gene id | G947818 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 15249885 ~ 15250633 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1080733 | False | 749 | lncRNA | 0.36 | 1 | 15249885 | 15250633 |
| TU1080732 | True | 528 | lncRNA | 0.39 | 1 | 15250106 | 15250633 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937468 | NA | coding | downstream | 28855 | 15219006 ~ 15221030 (-) |
| LOC110535332 | LOC106579536 | coding | downstream | 167118 | 15080524 ~ 15082767 (-) |
| mtfr1 | LOC106579534 | coding | downstream | 352306 | 14884317 ~ 14897579 (-) |
| LOC110535328 | dnjc5 | coding | downstream | 409226 | 14830974 ~ 14840659 (-) |
| LOC110535326 | NA | coding | downstream | 424286 | 14815506 ~ 14825629 (-) |
| LOC110535333 | LOC106590438 | coding | upstream | 638 | 15251271 ~ 15268657 (-) |
| pan3 | pan3 | coding | upstream | 188782 | 15439415 ~ 15455911 (-) |
| pdx1 | pdx1 | coding | upstream | 229865 | 15480498 ~ 15485495 (-) |
| si:ch211-140b10.6 | polr1d | coding | upstream | 241204 | 15491837 ~ 15497193 (-) |
| rpl21 | rpl21 | coding | upstream | 275804 | 15526437 ~ 15530037 (-) |
| G947838 | NA | non-coding | downstream | 941 | 15248713 ~ 15248944 (-) |
| G947837 | NA | non-coding | downstream | 1645 | 15248000 ~ 15248240 (-) |
| G947834 | NA | non-coding | downstream | 4176 | 15245499 ~ 15245709 (-) |
| G947832 | NA | non-coding | downstream | 7602 | 15241951 ~ 15242283 (-) |
| G947829 | NA | non-coding | downstream | 11980 | 15237575 ~ 15237905 (-) |
| G947847 | tagln3 | non-coding | upstream | 28893 | 15279526 ~ 15280261 (-) |
| G947879 | tmprss7 | non-coding | upstream | 84580 | 15335213 ~ 15335500 (-) |
| G947891 | NA | non-coding | upstream | 112419 | 15363052 ~ 15363391 (-) |
| G947899 | NA | non-coding | upstream | 118254 | 15368887 ~ 15369196 (-) |
| G947933 | NA | non-coding | upstream | 151840 | 15402473 ~ 15405013 (-) |
| G947750 | NA | other | downstream | 40288 | 15206431 ~ 15209597 (-) |
| ly86 | NA | other | downstream | 934199 | 14308595 ~ 14315733 (-) |
| G945345 | LOC105027308 | other | downstream | 2855747 | 12393397 ~ 12394138 (-) |
| LOC110536549 | LOC106579607 | other | downstream | 2891006 | 12348249 ~ 12366127 (-) |
| G947894 | LOC106579543 | other | upstream | 115317 | 15365950 ~ 15366301 (-) |
| LOC110535357 | LOC106579444 | other | upstream | 550142 | 15800721 ~ 15810494 (-) |
| LOC110536560 | LOC106579448 | other | upstream | 623696 | 15873634 ~ 15899014 (-) |
