Gene
RNA
| Item | Value |
|---|---|
| gene id | G947894 |
| gene name | LOC106579543 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 15365950 ~ 15366301 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1080827 | True | 352 | TUCP | 0.57 | 1 | 15365950 | 15366301 |
15,363,600
15,364,000
15,364,400
15,364,800
15,365,200
15,365,600
15,366,000
15,366,000
15,366,400
15,366,800
15,367,200
15,367,600
15,368,000
15,368,400
NC_048575.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535333 | LOC106590438 | coding | downstream | 97293 | 15251271 ~ 15268657 (-) |
| LOC118937468 | NA | coding | downstream | 144920 | 15219006 ~ 15221030 (-) |
| LOC110535332 | LOC106579536 | coding | downstream | 283183 | 15080524 ~ 15082767 (-) |
| mtfr1 | LOC106579534 | coding | downstream | 468371 | 14884317 ~ 14897579 (-) |
| LOC110535328 | dnjc5 | coding | downstream | 525291 | 14830974 ~ 14840659 (-) |
| pan3 | pan3 | coding | upstream | 73114 | 15439415 ~ 15455911 (-) |
| pdx1 | pdx1 | coding | upstream | 114197 | 15480498 ~ 15485495 (-) |
| si:ch211-140b10.6 | polr1d | coding | upstream | 125536 | 15491837 ~ 15497193 (-) |
| rpl21 | rpl21 | coding | upstream | 160136 | 15526437 ~ 15530037 (-) |
| wasf3b | LOC106579509 | coding | upstream | 181377 | 15547678 ~ 15570639 (-) |
| G947891 | NA | non-coding | downstream | 2559 | 15363052 ~ 15363391 (-) |
| G947879 | tmprss7 | non-coding | downstream | 30450 | 15335213 ~ 15335500 (-) |
| G947847 | tagln3 | non-coding | downstream | 85689 | 15279526 ~ 15280261 (-) |
| G947818 | NA | non-coding | downstream | 115317 | 15249885 ~ 15250633 (-) |
| G947838 | NA | non-coding | downstream | 117006 | 15248713 ~ 15248944 (-) |
| G947899 | NA | non-coding | upstream | 2586 | 15368887 ~ 15369196 (-) |
| G947933 | NA | non-coding | upstream | 36172 | 15402473 ~ 15405013 (-) |
| G947936 | NA | non-coding | upstream | 40684 | 15406985 ~ 15407199 (-) |
| G947941 | NA | non-coding | upstream | 42503 | 15408804 ~ 15409126 (-) |
| G948145 | NA | non-coding | upstream | 62081 | 15428382 ~ 15428623 (-) |
| G947750 | NA | other | downstream | 156353 | 15206431 ~ 15209597 (-) |
| ly86 | NA | other | downstream | 1050264 | 14308595 ~ 14315733 (-) |
| G945345 | LOC105027308 | other | downstream | 2971812 | 12393397 ~ 12394138 (-) |
| LOC110536549 | LOC106579607 | other | downstream | 3007071 | 12348249 ~ 12366127 (-) |
| LOC110535357 | LOC106579444 | other | upstream | 434474 | 15800721 ~ 15810494 (-) |
| LOC110536560 | LOC106579448 | other | upstream | 508028 | 15873634 ~ 15899014 (-) |
| drd3 | LOC106579486 | other | upstream | 623333 | 15988295 ~ 16040205 (-) |
