Gene
RNA
| Item | Value |
|---|---|
| gene id | G947999 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 15518492 ~ 15518714 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1080970 | True | 223 | lncRNA | 0.41 | 1 | 15518492 | 15518714 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lnx2a | lnx2 | coding | upstream | 331 | 15497461 ~ 15518161 (+) |
| urad | urad | coding | upstream | 38624 | 15478585 ~ 15479868 (+) |
| LOC110535338 | LOC106579503 | coding | upstream | 40270 | 15375660 ~ 15478222 (+) |
| LOC110536557 | LOC106579543 | coding | upstream | 150949 | 15342361 ~ 15367543 (+) |
| tmprss7 | tmprss7 | coding | upstream | 181302 | 15320582 ~ 15337190 (+) |
| usp12a | usp12 | coding | downstream | 11461 | 15530175 ~ 15534688 (+) |
| LOC110535348 | LOC106579510 | coding | downstream | 20964 | 15539678 ~ 15547074 (+) |
| rnf6 | LOC106579512 | coding | downstream | 68570 | 15587284 ~ 15593900 (+) |
| atp8a2 | LOC106579514 | coding | downstream | 75702 | 15594416 ~ 15660363 (+) |
| spice1 | spice1 | coding | downstream | 169546 | 15688260 ~ 15695114 (+) |
| G947980 | NA | non-coding | upstream | 26862 | 15491107 ~ 15491630 (+) |
| G947984 | NA | non-coding | upstream | 27981 | 15490288 ~ 15490511 (+) |
| G947956 | NA | non-coding | upstream | 80874 | 15436326 ~ 15437618 (+) |
| G947952 | NA | non-coding | upstream | 87612 | 15430587 ~ 15430880 (+) |
| G947951 | NA | non-coding | upstream | 90108 | 15427930 ~ 15428384 (+) |
| G948000 | NA | non-coding | downstream | 1750 | 15520464 ~ 15520678 (+) |
| G948005 | rpl21 | non-coding | downstream | 7723 | 15526437 ~ 15529942 (+) |
| G948011 | NA | non-coding | downstream | 19451 | 15538165 ~ 15538443 (+) |
| G948049 | LOC106579518 | non-coding | downstream | 176476 | 15695190 ~ 15699638 (+) |
| spata13 | LOC106579541 | other | upstream | 219119 | 15285042 ~ 15320246 (+) |
| G947301 | LOC106590396 | other | upstream | 631210 | 14886614 ~ 14887282 (+) |
| LOC110535322 | LOC106579526 | other | upstream | 848736 | 14665667 ~ 14715423 (+) |
| G946999 | NA | other | upstream | 934443 | 14582543 ~ 14584049 (+) |
| boc | LOC106579445 | other | downstream | 228659 | 15747150 ~ 15800515 (+) |
| G948524 | NA | other | downstream | 535351 | 16054065 ~ 16054638 (+) |
| sh3kbp1 | LOC106579452 | other | downstream | 554702 | 16073315 ~ 16098499 (+) |
