Gene
RNA
| Item | Value |
|---|---|
| gene id | G948092 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 15728690 ~ 15728894 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1081083 | True | 205 | lncRNA | 0.46 | 1 | 15728690 | 15728894 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| spice1 | spice1 | coding | upstream | 33576 | 15688260 ~ 15695114 (+) |
| atp8a2 | LOC106579514 | coding | upstream | 69753 | 15594416 ~ 15660363 (+) |
| rnf6 | LOC106579512 | coding | upstream | 134790 | 15587284 ~ 15593900 (+) |
| LOC110535348 | LOC106579510 | coding | upstream | 181616 | 15539678 ~ 15547074 (+) |
| usp12a | usp12 | coding | upstream | 194002 | 15530175 ~ 15534688 (+) |
| boc | LOC106579445 | coding | downstream | 18256 | 15747150 ~ 15800515 (+) |
| atp6v1ab | LOC106579446 | coding | downstream | 88481 | 15817375 ~ 15839784 (+) |
| gramd1c | LOC106579449 | coding | downstream | 112954 | 15841848 ~ 15857765 (+) |
| zdhhc23b | zdhhc23 | coding | downstream | 129625 | 15858519 ~ 15865400 (+) |
| sh3kbp1 | LOC106579452 | coding | downstream | 344421 | 16073315 ~ 16098499 (+) |
| G948049 | LOC106579518 | non-coding | upstream | 29052 | 15695190 ~ 15699638 (+) |
| G948011 | NA | non-coding | upstream | 190247 | 15538165 ~ 15538443 (+) |
| G948005 | rpl21 | non-coding | upstream | 198748 | 15526437 ~ 15529942 (+) |
| G948000 | NA | non-coding | upstream | 208012 | 15520464 ~ 15520678 (+) |
| G948115 | NA | non-coding | downstream | 50091 | 15778985 ~ 15781343 (+) |
| G948116 | NA | non-coding | downstream | 50739 | 15779633 ~ 15780297 (+) |
| G948318 | NA | non-coding | downstream | 98404 | 15827298 ~ 15828220 (+) |
| G948347 | NA | non-coding | downstream | 165550 | 15894444 ~ 15894934 (+) |
| G948410 | LOC100194703 | non-coding | downstream | 191191 | 15920085 ~ 15920430 (+) |
| LOC110535338 | LOC106579503 | other | upstream | 288828 | 15375660 ~ 15478222 (+) |
| spata13 | LOC106579541 | other | upstream | 429317 | 15285042 ~ 15320246 (+) |
| G947301 | LOC106590396 | other | upstream | 841408 | 14886614 ~ 14887282 (+) |
| G948524 | NA | other | downstream | 325171 | 16054065 ~ 16054638 (+) |
| ccl20b | LOC100135878 | other | downstream | 481035 | 16209929 ~ 16211192 (+) |
| G948587 | NA | other | downstream | 594456 | 16323350 ~ 16326407 (+) |
