XLOC_028620 (il22)


Basic Information

Item Value
gene id XLOC_028620
gene name il22
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 13544595 ~ 13548806 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055507
ATGGGGGATTACGCCAAAGGTGAAAAGACTACCACAGTGACGTACAGGCACGATATAAAAGCTCCAGAGCCACAAGATGCTCTACAAGTTTCGACATCGAGGAACAACGGTGTACATAAGAGGACAGATACCCGAATCCACTCATCTACCTGCGATATGAAGTGCTTTACTCTTATTGCTTTGCTGTGCTCGTGCTTTTTGAGCGGATGCGCGCGCCCCACTCCATTGGATAGCTCAGCCACCTGGAACGACCTCGCTGCGATGACTGATACAGCACGAAATGAAGACGATCACGAAACACGACTGCTTCCATATTTCTCCCACGATATGCTGCAAGAAGAAGGTTCCTGCTGCATCAATGCCAGAATTCTGAAATATTATGTAAATCACGTCTTGGAATCAGACGAGCACACAGATATGAAATACCCAATGATTCGCAATGTGAGGGAGGGTCTGCACAGAGTCGAGCAAGAATTGCAGAATCACTGTaaacACGACTACTCCAGCCATCCGCTTGTGAAGCAATTCAAGAGAAACTATCATGCCAGTGCAATTATGGATTTGGCCGCAGCCCGTAACAAAGCAATCGGGGAGACAAATACTCTCTACCACTACCTCTTTGAATCCTGCACTCCAAAGTGA

Function

symbol description
il22 Acts upstream of or within defense response to Gram-negative bacterium and regulation of inflammatory response. Is expressed in several structures, including caudal fin; gill; heart; liver; and pleuroperitoneal region. Orthologous to human IL22 (interleukin 22).

GO:

id name namespace
GO:0006955 immune response biological_process
GO:0050727 regulation of inflammatory response biological_process
GO:0050829 defense response to Gram-negative bacterium biological_process

KEGG:

id description
ko04630 JAK-STAT signaling pathway
ko04060 Cytokine-cytokine receptor interaction
ko04659 Th17 cell differentiation
ko05321 Inflammatory bowel disease
ko04052 Cytokines and growth factors

ZFIN:

id description
ZDB-GENE-060209-3 Acts upstream of or within defense response to Gram-negative bacterium and regulation of inflammatory response. Is expressed in several structures, including caudal fin; gill; heart; liver; and pleuroperitoneal region. Orthologous to human IL22 (interleukin 22).

Ensembl:

ensembl_id ENSDARG00000045673

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055507 True 642 mRNA 0.47 5 13544595 13548806

Neighbor

gene id symbol gene type direction distance location
XLOC_028619 il26 coding downstream 5881 13535054 ~ 13538714 (-)
XLOC_028618 ifng1r coding downstream 26214 13517446 ~ 13518381 (-)
XLOC_028617 ifng1 coding downstream 34649 13507584 ~ 13509946 (-)
XLOC_028616 si:ch211-266a5.12 coding downstream 42046 13499264 ~ 13502549 (-)
XLOC_028615 NA coding downstream 54514 13489763 ~ 13490081 (-)
XLOC_028621 mdm1 coding upstream 2594 13551400 ~ 13567516 (-)
XLOC_028622 opn1sw1 coding upstream 28859 13577665 ~ 13580348 (-)
XLOC_028623 irf5 coding upstream 56794 13605600 ~ 13614936 (-)
XLOC_028624 NA coding upstream 77176 13625982 ~ 13626833 (-)
XLOC_028625 BX897729.1 coding upstream 150179 13698985 ~ 13723156 (-)
XLOC_028614 NA non-coding downstream 65774 13477229 ~ 13478821 (-)
XLOC_028613 NA non-coding downstream 151425 13345672 ~ 13393170 (-)
XLOC_028611 NA non-coding downstream 520427 13023507 ~ 13024168 (-)
XLOC_028609 NA non-coding downstream 554897 12988978 ~ 12989698 (-)
XLOC_028626 NA non-coding upstream 331730 13880536 ~ 13889482 (-)
XLOC_028631 NA non-coding upstream 420355 13969161 ~ 13979713 (-)
XLOC_028632 NA non-coding upstream 557869 14106675 ~ 14162327 (-)
XLOC_028633 CR786571.2 non-coding upstream 618236 14167042 ~ 14170406 (-)

Expression


Co-expression Network