G948524


Basic Information

Item Value
gene id G948524
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 16054065 ~ 16054638 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1081573
tgtctcacctactgttttagctactgttttagctagctctcccaattcaacacctgtgattactgtatgcctcgctgtatgtctctctcaaatgtcaatatgccttgtatactgttgttcaggttagttatcattgttttagtttacaatggagcccctagttccactcttcatacccctgatacctcctttgtcccacctcccacacatgcggtgacctcacccattacaaccagcatgtccagagatacaaccactctcatcatcacccagtgcctgggcttacctccgctgtacccgcaccccaccatacccctgtctgcgcattatgccctgaatatattctaccatgcccagaaatctgctccttttattctctgtccccaacgctctagacgaccagttttgatagcctttagccgcaccctcattctactcctcctctgttccgcgggtgatgtggaggtaaacccaggccctgcatgtccccaggcaccctcatttgttgacttctgtgatcgaaaaagccttggtttcatgcatgtcaacatcagaagcctcctccttaAGTtgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1081573 True 574 TUCP 0.49 1 16054065 16054638

Neighbor

gene id symbol gene type direction distance location
zdhhc23b zdhhc23 coding upstream 188665 15858519 ~ 15865400 (+)
gramd1c LOC106579449 coding upstream 196300 15841848 ~ 15857765 (+)
atp6v1ab LOC106579446 coding upstream 214281 15817375 ~ 15839784 (+)
boc LOC106579445 coding upstream 253550 15747150 ~ 15800515 (+)
spice1 spice1 coding upstream 358951 15688260 ~ 15695114 (+)
sh3kbp1 LOC106579452 coding downstream 18677 16073315 ~ 16098499 (+)
map3k15 map3k15 coding downstream 43967 16098605 ~ 16205054 (+)
ccl20b LOC100135878 coding downstream 155353 16209929 ~ 16211192 (+)
tfr1b LOC106579454 coding downstream 186943 16241581 ~ 16253322 (+)
tnk2a LOC106579455 coding downstream 199371 16254009 ~ 16274994 (+)
G948494 NA non-coding upstream 49145 16004710 ~ 16004920 (+)
G948486 NA non-coding upstream 68286 15984758 ~ 15985779 (+)
G948482 NA non-coding upstream 73338 15980520 ~ 15980727 (+)
G948448 NA non-coding upstream 101995 15951850 ~ 15952070 (+)
G948426 NA non-coding upstream 120642 15933192 ~ 15933423 (+)
G948542 NA non-coding downstream 33827 16088465 ~ 16088974 (+)
G948545 NA non-coding downstream 82109 16136747 ~ 16173715 (+)
G948554 NA non-coding downstream 119654 16174292 ~ 16174572 (+)
atp8a2 LOC106579514 other upstream 394603 15594416 ~ 15660363 (+)
rnf6 LOC106579512 other upstream 464289 15587284 ~ 15593900 (+)
LOC110535338 LOC106579503 other upstream 614203 15375660 ~ 15478222 (+)
spata13 LOC106579541 other upstream 754692 15285042 ~ 15320246 (+)
G948587 NA other downstream 268712 16323350 ~ 16326407 (+)
LOC110535372 mynn other downstream 278419 16327393 ~ 16338373 (+)
LOC110535387 LOC106579475 other downstream 489177 16543682 ~ 16565783 (+)

Expression


Co-expression Network