Gene
RNA
| Item | Value |
|---|---|
| gene id | G948630 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 16299876 ~ 16300305 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110535369 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1081715 | True | 430 | lncRNA | 0.47 | 1 | 16299876 | 16300305 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| adipoqa | LOC106579495 | coding | upstream | 9132 | 16288944 ~ 16290744 (+) |
| tnk2a | LOC106579455 | coding | upstream | 24882 | 16254009 ~ 16274994 (+) |
| tfr1b | LOC106579454 | coding | upstream | 46554 | 16241581 ~ 16253322 (+) |
| ccl20b | LOC100135878 | coding | upstream | 88684 | 16209929 ~ 16211192 (+) |
| map3k15 | map3k15 | coding | upstream | 94822 | 16098605 ~ 16205054 (+) |
| LOC110535372 | mynn | coding | downstream | 27088 | 16327393 ~ 16338373 (+) |
| lrrc34 | lrrc34 | coding | downstream | 43023 | 16343328 ~ 16355927 (+) |
| klhl15 | klhl15 | coding | downstream | 83416 | 16383721 ~ 16397791 (+) |
| LOC110535377 | LOC106579463 | coding | downstream | 108340 | 16408645 ~ 16433176 (+) |
| LOC110535379 | LOC106579465 | coding | downstream | 134156 | 16434461 ~ 16441313 (+) |
| G948626 | LOC106579456 | non-coding | upstream | 699 | 16298938 ~ 16299177 (+) |
| G948577 | LOC106579456 | non-coding | upstream | 1274 | 16298356 ~ 16298602 (+) |
| G948583 | NA | non-coding | upstream | 21393 | 16266146 ~ 16278483 (+) |
| G948554 | NA | non-coding | upstream | 125304 | 16174292 ~ 16174572 (+) |
| G948629 | NA | non-coding | downstream | 1541 | 16301846 ~ 16302047 (+) |
| G948627 | NA | non-coding | downstream | 2627 | 16302932 ~ 16308626 (+) |
| G948638 | NA | non-coding | downstream | 21815 | 16322120 ~ 16322965 (+) |
| G948576 | NA | non-coding | downstream | 91061 | 16391366 ~ 16392176 (+) |
| G948565 | LOC106579466 | non-coding | downstream | 104862 | 16405167 ~ 16408397 (+) |
| sh3kbp1 | LOC106579452 | other | upstream | 216594 | 16073315 ~ 16098499 (+) |
| G948524 | NA | other | upstream | 245238 | 16054065 ~ 16054638 (+) |
| boc | LOC106579445 | other | upstream | 506842 | 15747150 ~ 15800515 (+) |
| atp8a2 | LOC106579514 | other | upstream | 640414 | 15594416 ~ 15660363 (+) |
| G948587 | NA | other | downstream | 23045 | 16323350 ~ 16326407 (+) |
| LOC110535387 | LOC106579475 | other | downstream | 243510 | 16543682 ~ 16565783 (+) |
| G948710 | NA | other | downstream | 253895 | 16554200 ~ 16601892 (+) |
| G951511 | NA | other | downstream | 2826360 | 19126665 ~ 19127085 (+) |
