XLOC_028624


Basic Information

Item Value
gene id XLOC_028624
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 13625982 ~ 13626833 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055517
ACTCATCGCCATGGAAACCGATGTCAACATGACAGAAGCGCTGACAGCTATGGAATCGGACAACGCAAATGCCGCTTGTCAAATCAAAAACATCGACTGGATCTCATGTAAAGACTTCACAATCGAAATCGGAGAGCAACAGATCAGACAATACATGGCCACGTGGGAGATCCAGCACCCCGGCTGGCTCTACAGTCTGACGTTTCTCCAGCAGGCAGAGCTGGAGTTCAAAACCCAGTACCAGTACGAGGTCCAGTGGAGCATCCCGACCCGATTCACCCCGATCCCCAGAGCCACGACCCGCGTCTACTTCATCATAGAGATCTCCAAAATCAAACCTGACAGCCTGCCCGTGAACGTGCATTTCATCATCGAAAGCAACCGCTCCAAACATGTTCCAGGACAAATGAGGTTCAGGGAAAAGTGGCTGATGGATGTCATCGAGAGCAAGACTTTGCTTTTAGACACTGTTGACTTTTAAAACATCGATATTTGTCAATATGACTGTGCTTGCAGAGAACATCTGTCAATGGAAATCAATTTAGTTGTACCTAATAGGAATATAACtagtttttcttttcattagaAATACAAAAACGCCTCATATTTACGGTAAATGTGGCCTAATTCATTGTTATGAGTAGTTATTTATGTCTATCTTTATAGATACTTATTTAATATCTTTATAAATGTGACGCTTTACTGATAATATATGTTTGTTATTTTCAAAAGGCTGCTCGTGGGACCTTTGGTCTTGTTATGATAAGCCAGTAATGGCTCAAATAATCAGTTCCGCTCGTTTAAATGTGAATTTGAAATATGGAGtagaataataaacaaacataccCGTCC

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0006928 movement of cell or subcellular component biological_process
GO:0048513 animal organ development biological_process
GO:0007275 multicellular organism development biological_process
GO:0009653 anatomical structure morphogenesis biological_process
GO:0048856 anatomical structure development biological_process
GO:0032989 cellular component morphogenesis biological_process
GO:0032501 multicellular organismal process biological_process
GO:0032502 developmental process biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055517 True 852 lncRNA 0.42 1 13625982 13626833

Neighbor

gene id symbol gene type direction distance location
XLOC_028623 irf5 coding downstream 11046 13605600 ~ 13614936 (-)
XLOC_028622 opn1sw1 coding downstream 45634 13577665 ~ 13580348 (-)
XLOC_028621 mdm1 coding downstream 58466 13551400 ~ 13567516 (-)
XLOC_028620 il22 coding downstream 77176 13544595 ~ 13548806 (-)
XLOC_028619 il26 coding downstream 87268 13535054 ~ 13538714 (-)
XLOC_028625 BX897729.1 coding upstream 72152 13698985 ~ 13723156 (-)
XLOC_028626 NA coding upstream 253703 13880536 ~ 13889482 (-)
XLOC_028627 gxylt1b coding upstream 265940 13892773 ~ 13902188 (-)
XLOC_028628 yaf2 coding upstream 278689 13905522 ~ 13921206 (-)
XLOC_028629 zcrb1 coding upstream 297094 13923927 ~ 13931508 (-)
XLOC_028615 NA non-coding downstream 135901 13489763 ~ 13490081 (-)
XLOC_028614 NA non-coding downstream 147161 13477229 ~ 13478821 (-)
XLOC_028613 NA non-coding downstream 232812 13345672 ~ 13393170 (-)
XLOC_028611 NA non-coding downstream 601814 13023507 ~ 13024168 (-)
XLOC_028609 NA non-coding downstream 636284 12988978 ~ 12989698 (-)
XLOC_028631 NA non-coding upstream 342328 13969161 ~ 13979713 (-)
XLOC_028632 NA non-coding upstream 479842 14106675 ~ 14162327 (-)
XLOC_028633 CR786571.2 non-coding upstream 540209 14167042 ~ 14170406 (-)
XLOC_028635 NA non-coding upstream 547406 14174239 ~ 14186729 (-)

Expression


Co-expression Network