Gene
RNA
| Item | Value |
|---|---|
| gene id | G948576 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 16391366 ~ 16392176 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1081654 | True | 811 | lncRNA | 0.36 | 1 | 16391366 | 16392176 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lrrc34 | lrrc34 | coding | upstream | 35439 | 16343328 ~ 16355927 (+) |
| LOC110535372 | mynn | coding | upstream | 52993 | 16327393 ~ 16338373 (+) |
| adipoqa | LOC106579495 | coding | upstream | 100622 | 16288944 ~ 16290744 (+) |
| tnk2a | LOC106579455 | coding | upstream | 116372 | 16254009 ~ 16274994 (+) |
| tfr1b | LOC106579454 | coding | upstream | 138044 | 16241581 ~ 16253322 (+) |
| LOC110535377 | LOC106579463 | coding | downstream | 16469 | 16408645 ~ 16433176 (+) |
| LOC110535379 | LOC106579465 | coding | downstream | 42285 | 16434461 ~ 16441313 (+) |
| LOC110516493 | LOC106579471 | coding | downstream | 52628 | 16444804 ~ 16478554 (+) |
| LOC110535384 | EIF1AX | coding | downstream | 105103 | 16497279 ~ 16513908 (+) |
| LOC110535386 | NA | coding | downstream | 132865 | 16525041 ~ 16529852 (+) |
| G948638 | NA | non-coding | upstream | 68401 | 16322120 ~ 16322965 (+) |
| G948627 | NA | non-coding | upstream | 82740 | 16302932 ~ 16308626 (+) |
| G948629 | NA | non-coding | upstream | 89319 | 16301846 ~ 16302047 (+) |
| G948630 | NA | non-coding | upstream | 91061 | 16299876 ~ 16300305 (+) |
| G948626 | LOC106579456 | non-coding | upstream | 92189 | 16298938 ~ 16299177 (+) |
| G948565 | LOC106579466 | non-coding | downstream | 12991 | 16405167 ~ 16408397 (+) |
| G948674 | NA | non-coding | downstream | 79538 | 16471714 ~ 16472562 (+) |
| G948569 | NA | non-coding | downstream | 86618 | 16478794 ~ 16480401 (+) |
| G948675 | NA | non-coding | downstream | 92815 | 16484991 ~ 16485279 (+) |
| G948677 | NA | non-coding | downstream | 96486 | 16488662 ~ 16489052 (+) |
| G948587 | NA | other | upstream | 64959 | 16323350 ~ 16326407 (+) |
| ccl20b | LOC100135878 | other | upstream | 180526 | 16209929 ~ 16211192 (+) |
| sh3kbp1 | LOC106579452 | other | upstream | 308084 | 16073315 ~ 16098499 (+) |
| G948524 | NA | other | upstream | 336728 | 16054065 ~ 16054638 (+) |
| LOC110535387 | LOC106579475 | other | downstream | 151639 | 16543682 ~ 16565783 (+) |
| G948710 | NA | other | downstream | 162024 | 16554200 ~ 16601892 (+) |
| G951511 | NA | other | downstream | 2734489 | 19126665 ~ 19127085 (+) |
| phldb2b | tcpe | other | downstream | 3369089 | 19740565 ~ 19799150 (+) |
| tlcd4a | LOC106570700 | other | downstream | 6334377 | 22712577 ~ 22741263 (+) |
