Gene
RNA
| Item | Value |
|---|---|
| gene id | G948675 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 16484991 ~ 16485279 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1081760 | True | 289 | lncRNA | 0.33 | 1 | 16484991 | 16485279 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516493 | LOC106579471 | coding | upstream | 6437 | 16444804 ~ 16478554 (+) |
| LOC110535379 | LOC106579465 | coding | upstream | 43678 | 16434461 ~ 16441313 (+) |
| LOC110535377 | LOC106579463 | coding | upstream | 51815 | 16408645 ~ 16433176 (+) |
| klhl15 | klhl15 | coding | upstream | 87200 | 16383721 ~ 16397791 (+) |
| lrrc34 | lrrc34 | coding | upstream | 129064 | 16343328 ~ 16355927 (+) |
| LOC110535384 | EIF1AX | coding | downstream | 12000 | 16497279 ~ 16513908 (+) |
| LOC110535386 | NA | coding | downstream | 39762 | 16525041 ~ 16529852 (+) |
| LOC110535385 | LOC106579474 | coding | downstream | 45357 | 16530636 ~ 16541258 (+) |
| LOC110535387 | LOC106579475 | coding | downstream | 58403 | 16543682 ~ 16565783 (+) |
| si:ch73-264p11.1 | LOC106579497 | coding | downstream | 110192 | 16595471 ~ 16606582 (+) |
| G948569 | NA | non-coding | upstream | 4590 | 16478794 ~ 16480401 (+) |
| G948674 | NA | non-coding | upstream | 12429 | 16471714 ~ 16472562 (+) |
| G948565 | LOC106579466 | non-coding | upstream | 76594 | 16405167 ~ 16408397 (+) |
| G948576 | NA | non-coding | upstream | 92815 | 16391366 ~ 16392176 (+) |
| G948638 | NA | non-coding | upstream | 162026 | 16322120 ~ 16322965 (+) |
| G948677 | NA | non-coding | downstream | 3383 | 16488662 ~ 16489052 (+) |
| G948678 | NA | non-coding | downstream | 4456 | 16489735 ~ 16489999 (+) |
| G948679 | NA | non-coding | downstream | 4991 | 16490270 ~ 16490683 (+) |
| G948682 | NA | non-coding | downstream | 9376 | 16494655 ~ 16494882 (+) |
| G948683 | NA | non-coding | downstream | 10310 | 16495589 ~ 16495819 (+) |
| LOC110535372 | mynn | other | upstream | 149699 | 16327393 ~ 16338373 (+) |
| G948587 | NA | other | upstream | 158584 | 16323350 ~ 16326407 (+) |
| ccl20b | LOC100135878 | other | upstream | 274151 | 16209929 ~ 16211192 (+) |
| sh3kbp1 | LOC106579452 | other | upstream | 401709 | 16073315 ~ 16098499 (+) |
| G948524 | NA | other | upstream | 430353 | 16054065 ~ 16054638 (+) |
| G948710 | NA | other | downstream | 68921 | 16554200 ~ 16601892 (+) |
| G951511 | NA | other | downstream | 2641386 | 19126665 ~ 19127085 (+) |
| phldb2b | tcpe | other | downstream | 3275986 | 19740565 ~ 19799150 (+) |
| tlcd4a | LOC106570700 | other | downstream | 6241274 | 22712577 ~ 22741263 (+) |
