Gene
RNA
| Item | Value |
|---|---|
| gene id | G948685 |
| gene name | LOC106579472 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 16496210 ~ 16496784 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1081774 | True | 575 | lncRNA | 0.40 | 1 | 16496210 | 16496784 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516493 | LOC106579471 | coding | upstream | 17656 | 16444804 ~ 16478554 (+) |
| LOC110535379 | LOC106579465 | coding | upstream | 54897 | 16434461 ~ 16441313 (+) |
| LOC110535377 | LOC106579463 | coding | upstream | 63034 | 16408645 ~ 16433176 (+) |
| klhl15 | klhl15 | coding | upstream | 98419 | 16383721 ~ 16397791 (+) |
| lrrc34 | lrrc34 | coding | upstream | 140283 | 16343328 ~ 16355927 (+) |
| LOC110535384 | EIF1AX | coding | downstream | 495 | 16497279 ~ 16513908 (+) |
| LOC110535386 | NA | coding | downstream | 28257 | 16525041 ~ 16529852 (+) |
| LOC110535385 | LOC106579474 | coding | downstream | 33852 | 16530636 ~ 16541258 (+) |
| LOC110535387 | LOC106579475 | coding | downstream | 46898 | 16543682 ~ 16565783 (+) |
| si:ch73-264p11.1 | LOC106579497 | coding | downstream | 98687 | 16595471 ~ 16606582 (+) |
| G948683 | NA | non-coding | upstream | 391 | 16495589 ~ 16495819 (+) |
| G948682 | NA | non-coding | upstream | 1328 | 16494655 ~ 16494882 (+) |
| G948679 | NA | non-coding | upstream | 5527 | 16490270 ~ 16490683 (+) |
| G948678 | NA | non-coding | upstream | 6211 | 16489735 ~ 16489999 (+) |
| G948677 | NA | non-coding | upstream | 7158 | 16488662 ~ 16489052 (+) |
| G948706 | NA | non-coding | downstream | 29088 | 16525872 ~ 16526071 (+) |
| G948707 | NA | non-coding | downstream | 30973 | 16527757 ~ 16527973 (+) |
| G948588 | NA | non-coding | downstream | 52472 | 16549256 ~ 16586210 (+) |
| G948712 | NA | non-coding | downstream | 65235 | 16562019 ~ 16562899 (+) |
| LOC110535372 | mynn | other | upstream | 160918 | 16327393 ~ 16338373 (+) |
| G948587 | NA | other | upstream | 169803 | 16323350 ~ 16326407 (+) |
| ccl20b | LOC100135878 | other | upstream | 285370 | 16209929 ~ 16211192 (+) |
| sh3kbp1 | LOC106579452 | other | upstream | 412928 | 16073315 ~ 16098499 (+) |
| G948524 | NA | other | upstream | 441572 | 16054065 ~ 16054638 (+) |
| G948710 | NA | other | downstream | 57416 | 16554200 ~ 16601892 (+) |
| G951511 | NA | other | downstream | 2629881 | 19126665 ~ 19127085 (+) |
| phldb2b | tcpe | other | downstream | 3264481 | 19740565 ~ 19799150 (+) |
| tlcd4a | LOC106570700 | other | downstream | 6229769 | 22712577 ~ 22741263 (+) |
