Gene
RNA
| Item | Value |
|---|---|
| gene id | G949544 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 16512386 ~ 16513910 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1082745 | True | 1496 | lncRNA | 0.40 | 2 | 16512386 | 16513910 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535381 | LOC106579472 | coding | downstream | 15551 | 16479705 ~ 16496835 (-) |
| LOC110535378 | LOC106579466 | coding | downstream | 103795 | 16405166 ~ 16408591 (-) |
| LOC110535375 | LOC106590489 | coding | downstream | 130664 | 16370850 ~ 16381722 (-) |
| lrrc31 | lrrc31 | coding | downstream | 144254 | 16361200 ~ 16368132 (-) |
| otos | LOC106579496 | coding | downstream | 197481 | 16312928 ~ 16314905 (-) |
| LOC110536562 | LOC106579476 | coding | upstream | 45284 | 16559194 ~ 16566168 (-) |
| LOC118937469 | NA | coding | upstream | 53438 | 16567348 ~ 16571559 (-) |
| LOC110535393 | LOC106579498 | coding | upstream | 273542 | 16787452 ~ 16790203 (-) |
| LOC110536607 | NA | coding | upstream | 287671 | 16801581 ~ 16803865 (-) |
| LOC100136317 | LOC100136317 | coding | upstream | 320488 | 16834398 ~ 16842818 (-) |
| G949534 | NA | non-coding | downstream | 21818 | 16490326 ~ 16490568 (-) |
| G949533 | NA | non-coding | downstream | 22132 | 16489686 ~ 16490254 (-) |
| G949503 | NA | non-coding | downstream | 27319 | 16484800 ~ 16485067 (-) |
| G949528 | NA | non-coding | downstream | 27709 | 16484458 ~ 16484677 (-) |
| G949545 | NA | non-coding | upstream | 10567 | 16524477 ~ 16524827 (-) |
| G949548 | NA | non-coding | upstream | 25067 | 16538977 ~ 16541256 (-) |
| G949552 | NA | non-coding | upstream | 29173 | 16543083 ~ 16543310 (-) |
| G949560 | NA | non-coding | upstream | 49724 | 16563634 ~ 16636989 (-) |
| G949635 | NA | non-coding | upstream | 203912 | 16717822 ~ 16719076 (-) |
| cops9 | NA | other | downstream | 203786 | 16302932 ~ 16308724 (-) |
| G949426 | NA | other | downstream | 218335 | 16293514 ~ 16294051 (-) |
| G949329 | NA | other | downstream | 462081 | 16049983 ~ 16050305 (-) |
| drd3 | LOC106579486 | other | downstream | 517502 | 15988295 ~ 16040205 (-) |
| tnfrsf11a | tnfrsf11a | other | upstream | 1352939 | 17858123 ~ 17879460 (-) |
| LOC110535423 | LOC106578417 | other | upstream | 1536760 | 18050118 ~ 18138989 (-) |
| G950851 | NA | other | upstream | 1641774 | 18155684 ~ 18157247 (-) |
