Gene
RNA
| Item | Value |
|---|---|
| gene id | G949635 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 16717822 ~ 16719076 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1082853 | True | 1156 | lncRNA | 0.40 | 3 | 16717822 | 16719076 |
16,715,200
16,715,600
16,716,000
16,716,400
16,716,800
16,717,200
16,717,600
16,718,000
16,718,400
16,718,400
16,718,800
16,719,200
16,719,600
16,720,000
16,720,400
16,720,800
16,721,200
16,721,600
NC_048575.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937469 | NA | coding | downstream | 146263 | 16567348 ~ 16571559 (-) |
| LOC110536562 | LOC106579476 | coding | downstream | 151654 | 16559194 ~ 16566168 (-) |
| LOC110535381 | LOC106579472 | coding | downstream | 220987 | 16479705 ~ 16496835 (-) |
| LOC110535378 | LOC106579466 | coding | downstream | 309231 | 16405166 ~ 16408591 (-) |
| LOC110535375 | LOC106590489 | coding | downstream | 336100 | 16370850 ~ 16381722 (-) |
| LOC110535393 | LOC106579498 | coding | upstream | 68376 | 16787452 ~ 16790203 (-) |
| LOC110536607 | NA | coding | upstream | 82505 | 16801581 ~ 16803865 (-) |
| LOC100136317 | LOC100136317 | coding | upstream | 115322 | 16834398 ~ 16842818 (-) |
| LOC110535396 | nceh1 | coding | upstream | 130675 | 16849751 ~ 16855529 (-) |
| LOC110535400 | LOC106578397 | coding | upstream | 296216 | 17015292 ~ 17017135 (-) |
| G949560 | NA | non-coding | downstream | 80833 | 16563634 ~ 16636989 (-) |
| G949552 | NA | non-coding | downstream | 174512 | 16543083 ~ 16543310 (-) |
| G949548 | NA | non-coding | downstream | 176566 | 16538977 ~ 16541256 (-) |
| G949545 | NA | non-coding | downstream | 192995 | 16524477 ~ 16524827 (-) |
| G949544 | NA | non-coding | downstream | 203912 | 16512386 ~ 16513910 (-) |
| G949671 | LOC106579490 | non-coding | upstream | 38741 | 16757817 ~ 16760849 (-) |
| G949690 | NA | non-coding | upstream | 74760 | 16793836 ~ 16794120 (-) |
| G949693 | NA | non-coding | upstream | 80057 | 16799133 ~ 16799333 (-) |
| G949694 | NA | non-coding | upstream | 176460 | 16895536 ~ 16896534 (-) |
| G949770 | LOC106578374 | non-coding | upstream | 210234 | 16929310 ~ 16929846 (-) |
| otos | LOC106579496 | other | downstream | 402975 | 16312928 ~ 16314905 (-) |
| cops9 | NA | other | downstream | 409222 | 16302932 ~ 16308724 (-) |
| G949426 | NA | other | downstream | 423771 | 16293514 ~ 16294051 (-) |
| G949329 | NA | other | downstream | 667517 | 16049983 ~ 16050305 (-) |
| tnfrsf11a | tnfrsf11a | other | upstream | 1147773 | 17858123 ~ 17879460 (-) |
| LOC110535423 | LOC106578417 | other | upstream | 1331594 | 18050118 ~ 18138989 (-) |
| G950851 | NA | other | upstream | 1436608 | 18155684 ~ 18157247 (-) |
| zfhx4 | LOC106578414 | other | upstream | 1524134 | 18234892 ~ 18365014 (-) |
