Gene
RNA
| Item | Value |
|---|---|
| gene id | G948864 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 16740116 ~ 16744527 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1081964 | True | 721 | lncRNA | 0.43 | 3 | 16740116 | 16744527 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535391 | LOC106579478 | coding | upstream | 21018 | 16692465 ~ 16719098 (+) |
| LOC110536563 | LOC105022008 | coding | upstream | 56515 | 16672090 ~ 16683601 (+) |
| chrnd | chrnd | coding | upstream | 107428 | 16621214 ~ 16632688 (+) |
| si:ch73-264p11.1 | LOC106579497 | coding | upstream | 133534 | 16595471 ~ 16606582 (+) |
| LOC110535387 | LOC106579475 | coding | upstream | 174333 | 16543682 ~ 16565783 (+) |
| LOC100136266 | LOC100136266 | coding | downstream | 19190 | 16763717 ~ 16785704 (+) |
| LOC110535395 | msl2 | coding | downstream | 81458 | 16825985 ~ 16832892 (+) |
| LOC110535397 | pld1 | coding | downstream | 122140 | 16866667 ~ 16895512 (+) |
| LOC110536565 | LOC106578374 | coding | downstream | 157838 | 16902365 ~ 16957064 (+) |
| LOC110535399 | LOC106590523 | coding | downstream | 217160 | 16961687 ~ 16976531 (+) |
| G948737 | NA | non-coding | upstream | 88820 | 16595393 ~ 16651296 (+) |
| G948588 | NA | non-coding | upstream | 153906 | 16549256 ~ 16586210 (+) |
| G948712 | NA | non-coding | upstream | 177217 | 16562019 ~ 16562899 (+) |
| LOC110535386 | NA | non-coding | upstream | 210675 | 16525041 ~ 16529852 (+) |
| G948865 | NA | non-coding | downstream | 2412 | 16746939 ~ 16748502 (+) |
| G948868 | NA | non-coding | downstream | 5088 | 16749615 ~ 16750464 (+) |
| G948883 | NA | non-coding | downstream | 51915 | 16796442 ~ 16796686 (+) |
| G948904 | NA | non-coding | downstream | 101927 | 16846454 ~ 16846732 (+) |
| G948798 | NA | non-coding | downstream | 151005 | 16895532 ~ 16896521 (+) |
| G948710 | NA | other | upstream | 138224 | 16554200 ~ 16601892 (+) |
| LOC110535372 | mynn | other | upstream | 404824 | 16327393 ~ 16338373 (+) |
| G948587 | NA | other | upstream | 413709 | 16323350 ~ 16326407 (+) |
| ccl20b | LOC100135878 | other | upstream | 529276 | 16209929 ~ 16211192 (+) |
| G951511 | NA | other | downstream | 2382138 | 19126665 ~ 19127085 (+) |
| phldb2b | tcpe | other | downstream | 3016738 | 19740565 ~ 19799150 (+) |
| tlcd4a | LOC106570700 | other | downstream | 5982026 | 22712577 ~ 22741263 (+) |
| G956728 | LOC106613263 | other | downstream | 6920761 | 23665288 ~ 23665930 (+) |
| G956797 | NA | other | downstream | 7031245 | 23775772 ~ 23776845 (+) |
