Gene
RNA
| Item | Value |
|---|---|
| gene id | G948883 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 16796442 ~ 16796686 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1081983 | True | 245 | lncRNA | 0.36 | 1 | 16796442 | 16796686 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100136266 | LOC100136266 | coding | upstream | 10738 | 16763717 ~ 16785704 (+) |
| LOC110536564 | LOC106590456 | coding | upstream | 35592 | 16719524 ~ 16760850 (+) |
| LOC110535391 | LOC106579478 | coding | upstream | 77344 | 16692465 ~ 16719098 (+) |
| LOC110536563 | LOC105022008 | coding | upstream | 112841 | 16672090 ~ 16683601 (+) |
| chrnd | chrnd | coding | upstream | 163754 | 16621214 ~ 16632688 (+) |
| LOC110535395 | msl2 | coding | downstream | 29299 | 16825985 ~ 16832892 (+) |
| LOC110535397 | pld1 | coding | downstream | 69981 | 16866667 ~ 16895512 (+) |
| LOC110536565 | LOC106578374 | coding | downstream | 105679 | 16902365 ~ 16957064 (+) |
| LOC110535399 | LOC106590523 | coding | downstream | 165001 | 16961687 ~ 16976531 (+) |
| LOC118937438 | NA | coding | downstream | 199275 | 16995961 ~ 16997111 (+) |
| G948868 | NA | non-coding | upstream | 45978 | 16749615 ~ 16750464 (+) |
| G948865 | NA | non-coding | upstream | 47940 | 16746939 ~ 16748502 (+) |
| G948864 | NA | non-coding | upstream | 51915 | 16740116 ~ 16744527 (+) |
| G948863 | NA | non-coding | upstream | 53777 | 16738949 ~ 16742665 (+) |
| G948737 | NA | non-coding | upstream | 145146 | 16595393 ~ 16651296 (+) |
| G948904 | NA | non-coding | downstream | 49768 | 16846454 ~ 16846732 (+) |
| G948798 | NA | non-coding | downstream | 98846 | 16895532 ~ 16896521 (+) |
| G948814 | NA | non-coding | downstream | 161506 | 16958192 ~ 17158652 (+) |
| G948953 | NA | non-coding | downstream | 175865 | 16972551 ~ 16973050 (+) |
| G948797 | NA | non-coding | downstream | 237475 | 17034161 ~ 17035973 (+) |
| G948710 | NA | other | upstream | 194550 | 16554200 ~ 16601892 (+) |
| LOC110535387 | LOC106579475 | other | upstream | 251153 | 16543682 ~ 16565783 (+) |
| LOC110535372 | mynn | other | upstream | 461150 | 16327393 ~ 16338373 (+) |
| G948587 | NA | other | upstream | 470035 | 16323350 ~ 16326407 (+) |
| ccl20b | LOC100135878 | other | upstream | 585602 | 16209929 ~ 16211192 (+) |
| G951511 | NA | other | downstream | 2329979 | 19126665 ~ 19127085 (+) |
| phldb2b | tcpe | other | downstream | 2964579 | 19740565 ~ 19799150 (+) |
| tlcd4a | LOC106570700 | other | downstream | 5929867 | 22712577 ~ 22741263 (+) |
| G956728 | LOC106613263 | other | downstream | 6868602 | 23665288 ~ 23665930 (+) |
| G956797 | NA | other | downstream | 6979086 | 23775772 ~ 23776845 (+) |
