G949694


Basic Information

Item Value
gene id G949694
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 16895536 ~ 16896534 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1082929
AAATAATTAAATCCGTGAATTATCAGTATTTGGGTTTTCCTACAAGACACAATCAGTCTGTGCAAAAAGTGCAATTTCTAGAAACAGTGAAAGTTAGAGTGAAAGAGAAATGTCCTAAAGAGGAACAACGACAGGACAGAGAAAATAAATGAGAAGGAACAGAGAGAAAAGGACAGTGACagagaaagggggacagagcatCGTTGATACATTCTGATATGAGACCGTTGGGACTTCCTCCCATGGAGACCTCTTATCTCTGACAGAACTGTTACAGTCAGTAAAGTAAGAAGATAACTTAATTTTGGTATAATGACCACAGTCCAGCCATTTACTAGGAAGCAAACGGTAAGCATATCAGTTAGCtaccagggttgggctcaattcaaaGTAAACTACAAATCAATTATCGGGAAAAAAATAGCATTTATTTTCAAGGACTTCTCAAACTGAAAAGAAGCAGCTatttatttcaattttattttaatACAAAATCACTTCCTGAACTTACTGTCTTCAATTAGAATTAAGACCAACCTTGCTACTGTAGCTACATGCCGGGTGTAGCTAAAAATGGACTGACTCTAGCTAGCATGCTAATGATTGCATGGACTGGTAGCTAACATGACAAGTTACCAGCAACACACAGCAGACTGACTTGTTTTCATGCTAATGGATACGTGCAGTGACAAGCTAGCATGCTAACAGCTACGTGCAGCATCATACAACATTCCAAGATGGAATACAATGTCCCTTTGTGTTTTGCTATTGTAGGGTGTCTATCCCTCTAGAGACCTAAAGGCACACTAGTAGAAACAGTGATCCTTAAGGTCATAGTCTGAAATCCACAGAATGAATATGAGGAATGTAAGAGAAGGCATACTGCATTAACATTACCGTATCAATAATTGGCACTTGTGTTGAGTTCATGTGATTTCATTTTGGTGTTAAGGGCAGGGCTTTAAGATTTCACCTGCACACTGTGACTGCAAGGgcaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1082929 True 999 lncRNA 0.39 1 16895536 16896534

Neighbor

gene id symbol gene type direction distance location
LOC110535396 nceh1 coding downstream 40007 16849751 ~ 16855529 (-)
LOC100136317 LOC100136317 coding downstream 52718 16834398 ~ 16842818 (-)
LOC110536607 NA coding downstream 91671 16801581 ~ 16803865 (-)
LOC110535393 LOC106579498 coding downstream 105333 16787452 ~ 16790203 (-)
LOC118937469 NA coding downstream 323977 16567348 ~ 16571559 (-)
LOC110535400 LOC106578397 coding upstream 118758 17015292 ~ 17017135 (-)
LOC110535401 LOC106578376 coding upstream 121122 17017656 ~ 17021148 (-)
LOC110535402 LOC106578378 coding upstream 137627 17034161 ~ 17035895 (-)
c8g LOC100136109 coding upstream 140117 17036651 ~ 17042895 (-)
msrb2 LOC106578379 coding upstream 148203 17044737 ~ 17047374 (-)
G949693 NA non-coding downstream 96203 16799133 ~ 16799333 (-)
G949690 NA non-coding downstream 101416 16793836 ~ 16794120 (-)
G949671 LOC106579490 non-coding downstream 134687 16757817 ~ 16760849 (-)
G949635 NA non-coding downstream 176460 16717822 ~ 16719076 (-)
G949560 NA non-coding downstream 258547 16563634 ~ 16636989 (-)
G949770 LOC106578374 non-coding upstream 32776 16929310 ~ 16929846 (-)
G949736 NA non-coding upstream 70623 16967157 ~ 16976538 (-)
G949803 NA non-coding upstream 127202 17023736 ~ 17025028 (-)
G949820 NA non-coding upstream 153690 17050224 ~ 17093027 (-)
G949852 NA non-coding upstream 204165 17100699 ~ 17101145 (-)
otos LOC106579496 other downstream 580689 16312928 ~ 16314905 (-)
cops9 NA other downstream 586936 16302932 ~ 16308724 (-)
G949426 NA other downstream 601485 16293514 ~ 16294051 (-)
tnfrsf11a tnfrsf11a other upstream 970315 17858123 ~ 17879460 (-)
LOC110535423 LOC106578417 other upstream 1154136 18050118 ~ 18138989 (-)
G950851 NA other upstream 1259150 18155684 ~ 18157247 (-)
zfhx4 LOC106578414 other upstream 1346676 18234892 ~ 18365014 (-)
G951231 NA other upstream 1680781 18577315 ~ 18583155 (-)

Expression

G949694 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 8.
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G949694 Expression in each Bioproject

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G949694 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 50.
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Co-expression Network