Gene
RNA
| Item | Value |
|---|---|
| gene id | G948793 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 17036671 ~ 17042940 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1081893 | True | 982 | lncRNA | 0.51 | 7 | 17036671 | 17042940 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937438 | NA | coding | upstream | 39560 | 16995961 ~ 16997111 (+) |
| LOC110535399 | LOC106590523 | coding | upstream | 60140 | 16961687 ~ 16976531 (+) |
| LOC110536565 | LOC106578374 | coding | upstream | 79607 | 16902365 ~ 16957064 (+) |
| LOC110535397 | pld1 | coding | upstream | 141159 | 16866667 ~ 16895512 (+) |
| LOC110535395 | msl2 | coding | upstream | 203779 | 16825985 ~ 16832892 (+) |
| pip4k2aa | LOC106578380 | coding | downstream | 22944 | 17065884 ~ 17108912 (+) |
| mllt10 | mllt10 | coding | downstream | 85487 | 17128427 ~ 17211793 (+) |
| bmi1a | LOC106578384 | coding | downstream | 211715 | 17254655 ~ 17271169 (+) |
| spag6 | spag6 | coding | downstream | 238467 | 17281407 ~ 17285569 (+) |
| LOC110536567 | pkd1l1 | coding | downstream | 246682 | 17289622 ~ 17342631 (+) |
| G948797 | NA | non-coding | upstream | 698 | 17034161 ~ 17035973 (+) |
| G948953 | NA | non-coding | upstream | 63621 | 16972551 ~ 16973050 (+) |
| G948798 | NA | non-coding | upstream | 140150 | 16895532 ~ 16896521 (+) |
| G948904 | NA | non-coding | upstream | 189939 | 16846454 ~ 16846732 (+) |
| G948883 | NA | non-coding | upstream | 239985 | 16796442 ~ 16796686 (+) |
| G949033 | NA | non-coding | downstream | 173701 | 17216641 ~ 17216871 (+) |
| G949042 | NA | non-coding | downstream | 187196 | 17230136 ~ 17230431 (+) |
| G949044 | NA | non-coding | downstream | 189861 | 17232801 ~ 17233502 (+) |
| G948710 | NA | other | upstream | 434779 | 16554200 ~ 16601892 (+) |
| LOC110535387 | LOC106579475 | other | upstream | 491382 | 16543682 ~ 16565783 (+) |
| LOC110535372 | mynn | other | upstream | 701379 | 16327393 ~ 16338373 (+) |
| G948587 | NA | other | upstream | 710264 | 16323350 ~ 16326407 (+) |
| ccl20b | LOC100135878 | other | upstream | 825831 | 16209929 ~ 16211192 (+) |
| G951511 | NA | other | downstream | 2083725 | 19126665 ~ 19127085 (+) |
| phldb2b | tcpe | other | downstream | 2718325 | 19740565 ~ 19799150 (+) |
| tlcd4a | LOC106570700 | other | downstream | 5683613 | 22712577 ~ 22741263 (+) |
| G956728 | LOC106613263 | other | downstream | 6622348 | 23665288 ~ 23665930 (+) |
| G956797 | NA | other | downstream | 6732832 | 23775772 ~ 23776845 (+) |
